| Positive correlation | Negative correlation | ||
| Gene | r | Gene | r |
| hoxb3a | 0.255 | krt91 | -0.135 |
| cdx4 | 0.236 | krtt1c19e | -0.124 |
| hoxc3a | 0.222 | krt5 | -0.120 |
| hoxc8a | 0.213 | anxa1a | -0.119 |
| BX005254.3 | 0.192 | si:dkey-33c14.3 | -0.118 |
| apoc1 | 0.192 | col1a1b | -0.117 |
| hoxb9a | 0.192 | aqp3a | -0.117 |
| hoxc6b | 0.188 | eef1da | -0.116 |
| hoxb7a | 0.186 | col1a1a | -0.115 |
| emx2 | 0.183 | rbp4 | -0.114 |
| vcana | 0.176 | gapdhs | -0.113 |
| b3gnt7 | 0.175 | capns1a | -0.112 |
| hoxb10a | 0.168 | col1a2 | -0.111 |
| LOC101882251 | 0.167 | cxl34b.11 | -0.111 |
| hoxd3a | 0.167 | cotl1 | -0.106 |
| nradd | 0.166 | anxa2a | -0.104 |
| insl5a | 0.165 | epgn | -0.102 |
| hoxb1b | 0.163 | s100a10b | -0.100 |
| mllt3 | 0.162 | ak1 | -0.100 |
| prickle1a | 0.161 | postnb | -0.099 |
| asb11 | 0.159 | zgc:136930 | -0.099 |
| tmeff1b | 0.159 | sparc | -0.098 |
| znfl2a | 0.157 | lgals1l1 | -0.098 |
| hoxb8a | 0.155 | capgb | -0.097 |
| si:ch211-199g17.2 | 0.155 | si:dkey-183i3.5 | -0.095 |
| dact2 | 0.155 | col14a1b | -0.094 |
| BX927258.1 | 0.155 | rplp2 | -0.092 |
| lin28a | 0.153 | wu:fa03e10 | -0.092 |
| hoxd9a | 0.152 | col17a1a | -0.088 |
| sp8a | 0.152 | cdo1 | -0.085 |
| lypd6b | 0.151 | aep1 | -0.084 |
| hoxa9b | 0.150 | itm2bb | -0.083 |
| tpm4a | 0.150 | col2a1b | -0.083 |
| lsp1 | 0.148 | igfbp7 | -0.082 |
| ptgs1 | 0.148 | pycard | -0.082 |