Gene expression UMAP
Other cell groups
all cells |
blastomeres |
PGCs |
endoderm |
axial mesoderm |
muscle  |
mural cells / non-skeletal muscle  |
mesenchyme  |
hematopoietic / vasculature  |
pronephros  |
neural |
spinal cord / glia |
eye |
taste / olfactory |
otic / lateral line |
epidermis |
periderm |
fin |
ionocytes / mucous |
pigment cells |
Expression by stage/cluster
Correlated gene expression
| Positive correlation | Negative correlation | ||
| Gene | r | Gene | r |
| BX005254.3 | 0.305 | s100a10b | -0.091 |
| cdx4 | 0.298 | gapdhs | -0.089 |
| hoxb7a | 0.272 | capns1a | -0.087 |
| hoxb10a | 0.258 | cotl1 | -0.085 |
| hoxb9a | 0.247 | aqp3a | -0.085 |
| hoxc6b | 0.238 | anxa1a | -0.085 |
| cdaa | 0.233 | krt91 | -0.082 |
| hoxa9a | 0.227 | col1a1b | -0.082 |
| hoxd12a | 0.222 | eef1da | -0.082 |
| hoxc8a | 0.221 | sparc | -0.081 |
| hoxd9a | 0.209 | col1a1a | -0.079 |
| LOC101882251 | 0.208 | col1a2 | -0.078 |
| emx2 | 0.207 | krtt1c19e | -0.075 |
| crabp2a | 0.207 | postnb | -0.073 |
| BX001014.2 | 0.202 | rplp2 | -0.072 |
| hoxa10b | 0.200 | anxa2a | -0.072 |
| hoxa9b | 0.197 | rbp4 | -0.070 |
| sp5l | 0.197 | capgb | -0.068 |
| hoxd10a | 0.197 | si:dkey-33c14.3 | -0.068 |
| sp8b | 0.193 | si:ch211-39i22.1 | -0.063 |
| insl5a | 0.190 | rps29 | -0.062 |
| nkx1.2la | 0.190 | s100v1 | -0.062 |
| si:dkey-187j14.6 | 0.189 | col14a1b | -0.061 |
| apoc1 | 0.185 | cxl34b.11 | -0.061 |
| hoxc3a | 0.177 | itgb4 | -0.061 |
| apela | 0.175 | pycard | -0.060 |
| BX927258.1 | 0.171 | col2a1b | -0.060 |
| vcana | 0.170 | ak1 | -0.060 |
| prickle1a | 0.167 | s100v2 | -0.060 |
| hspb1 | 0.165 | epgn | -0.059 |
| hoxd11a | 0.164 | ahcy | -0.058 |
| BX005254.2 | 0.163 | pvalb1 | -0.058 |
| nradd | 0.160 | itm2bb | -0.057 |
| lin28a | 0.157 | hcls1 | -0.056 |
| emx3 | 0.157 | aep1 | -0.056 |