Gene expression UMAP
Other cell groups
all cells |
blastomeres |
PGCs |
endoderm |
axial mesoderm |
muscle  |
mural cells / non-skeletal muscle  |
mesenchyme  |
hematopoietic / vasculature  |
pronephros  |
neural |
spinal cord / glia |
eye |
taste / olfactory |
otic / lateral line |
epidermis |
periderm |
fin |
ionocytes / mucous |
pigment cells |
Expression by stage/cluster
Correlated gene expression
| Positive correlation | Negative correlation | ||
| Gene | r | Gene | r |
| hoxb7a | 0.240 | hbae1.1 | -0.047 |
| BX005254.3 | 0.230 | hbbe1.3 | -0.047 |
| hoxb10a | 0.230 | hbae3 | -0.046 |
| mnx1 | 0.213 | prdx2 | -0.043 |
| CR383672.2 | 0.210 | hbbe1.1 | -0.041 |
| hoxc3a | 0.182 | hbae1.3 | -0.041 |
| tbxtb | 0.178 | hbbe2 | -0.041 |
| hoxc6b | 0.175 | cahz | -0.036 |
| fbln1 | 0.174 | hbbe1.2 | -0.036 |
| BX001014.2 | 0.173 | pvalb1 | -0.036 |
| npas4l | 0.171 | blvrb | -0.035 |
| fgf10b | 0.166 | hemgn | -0.035 |
| LOC108180265 | 0.165 | tspo | -0.034 |
| cdx4 | 0.164 | alas2 | -0.032 |
| BX005396.1 | 0.160 | pvalb2 | -0.032 |
| pth2r | 0.159 | slc4a1a | -0.031 |
| casc1 | 0.156 | si:ch211-250g4.3 | -0.031 |
| lbx2 | 0.148 | actc1b | -0.031 |
| hoxc8a | 0.140 | creg1 | -0.030 |
| eva1bb | 0.139 | gpx1a | -0.029 |
| cx43.4 | 0.138 | nt5c2l1 | -0.029 |
| XLOC-016801 | 0.136 | epb41b | -0.028 |
| lsp1 | 0.136 | zgc:163057 | -0.028 |
| si:ch211-130h14.4 | 0.134 | tmem14ca | -0.028 |
| dact2 | 0.132 | sod1 | -0.027 |
| vcana | 0.131 | nmt1b | -0.027 |
| BX005254.2 | 0.131 | si:ch211-207c6.2 | -0.026 |
| sall4 | 0.130 | plac8l1 | -0.025 |
| emilin2b | 0.130 | si:ch211-227m13.1 | -0.024 |
| hoxb9a | 0.129 | sptb | -0.024 |
| wu:fb97g03 | 0.128 | tmod4 | -0.024 |
| tbxta | 0.127 | mylpfa | -0.023 |
| ccdc175 | 0.127 | clic2 | -0.023 |
| fbn2a.1 | 0.127 | hdr | -0.023 |
| hnf1bb | 0.125 | gapdhs | -0.022 |