Gene expression UMAP
Other cell groups
all cells |
blastomeres |
PGCs |
endoderm |
axial mesoderm |
muscle  |
mural cells / non-skeletal muscle  |
mesenchyme  |
hematopoietic / vasculature  |
pronephros  |
neural |
spinal cord / glia |
eye |
taste / olfactory |
otic / lateral line |
epidermis |
periderm |
fin |
ionocytes / mucous |
pigment cells |
Expression by stage/cluster
Correlated gene expression
| Positive correlation | Negative correlation | ||
| Gene | r | Gene | r |
| ca4a | 0.190 | tuba8l2 | -0.040 |
| pitx2 | 0.183 | apoc1 | -0.030 |
| alx4a | 0.154 | apoeb | -0.029 |
| si:dkey-98f17.3 | 0.147 | znf503 | -0.029 |
| lhx1a | 0.144 | BX927258.1 | -0.027 |
| si:ch211-106j21.6 | 0.141 | hoxc3a | -0.027 |
| pfkfb2a | 0.139 | si:dkey-16p21.8 | -0.026 |
| nkx1.2lb | 0.134 | fn1b | -0.026 |
| tbx15 | 0.132 | uqcrfs1 | -0.026 |
| si:dkey-1b17.6 | 0.132 | polr3gla | -0.026 |
| fkbp1ab | 0.128 | zgc:56699 | -0.025 |
| ptprz1b | 0.126 | aldoaa | -0.025 |
| tat | 0.116 | meis1b | -0.024 |
| her4.2 | 0.115 | meox1 | -0.024 |
| glulc | 0.114 | sp5l | -0.023 |
| barx2 | 0.104 | cyc1 | -0.023 |
| pitx3 | 0.102 | cycsb | -0.023 |
| si:dkey-192g7.3 | 0.099 | plp2 | -0.023 |
| si:dkey-30j16.3 | 0.099 | prtfdc1 | -0.023 |
| emx1 | 0.097 | tcf15 | -0.023 |
| LOC108183877 | 0.094 | si:ch211-214j24.10 | -0.023 |
| thbs3b | 0.094 | cdx4 | -0.023 |
| lmx1bb | 0.092 | ldb3b | -0.023 |
| tmsb | 0.092 | hoxc6b | -0.023 |
| dachc | 0.092 | hoxb3a | -0.023 |
| XLOC-005893 | 0.092 | LOC110438394 | -0.023 |
| chrna5 | 0.091 | hoxc8a | -0.022 |
| adcy5 | 0.091 | frem3 | -0.022 |
| lmx1ba | 0.091 | dld | -0.022 |
| osr2 | 0.090 | XLOC-006515 | -0.021 |
| foxp1b | 0.089 | pgam2 | -0.021 |
| or111-4 | 0.088 | cavin4b | -0.021 |
| zeb2b | 0.087 | casq2 | -0.021 |
| CU655829.1 | 0.085 | actn3b | -0.021 |
| lbx1a | 0.084 | hoxb7a | -0.021 |