Gene expression UMAP
Other cell groups
all cells |
blastomeres |
PGCs |
endoderm |
axial mesoderm |
muscle  |
mural cells / non-skeletal muscle  |
mesenchyme  |
hematopoietic / vasculature  |
pronephros  |
neural |
spinal cord / glia |
eye |
taste / olfactory |
otic / lateral line |
epidermis |
periderm |
fin |
ionocytes / mucous |
pigment cells |
Expression by stage/cluster
Correlated gene expression
| Positive correlation | Negative correlation | ||
| Gene | r | Gene | r |
| lmx1bb | 0.273 | col5a2a | -0.067 |
| cthrc1b | 0.269 | rpl36a | -0.064 |
| oatx | 0.265 | fn1b | -0.063 |
| RNF14 (1 of many) | 0.255 | cfd | -0.062 |
| fam19a5a | 0.255 | krt8 | -0.061 |
| tfap2b | 0.245 | hand2 | -0.060 |
| prkacba | 0.236 | col6a2 | -0.059 |
| ptger4a | 0.236 | meis1b | -0.058 |
| calhm3 | 0.226 | cav1 | -0.056 |
| si:ch211-33e4.2 | 0.226 | cavin2b | -0.056 |
| si:ch211-198g14.2 | 0.215 | rpl6 | -0.055 |
| CR457444.7 | 0.204 | meis1a | -0.054 |
| CR847530.1 | 0.203 | col6a1 | -0.054 |
| sstr5 | 0.203 | hspb1 | -0.053 |
| rln3b | 0.200 | rps28 | -0.053 |
| CU694197.2 | 0.194 | csrp1a | -0.052 |
| LOC561361 | 0.192 | plod2 | -0.050 |
| si:zfos-1069f5.1 | 0.191 | tmem88b | -0.050 |
| adra1aa | 0.191 | rdh10a | -0.049 |
| ccl38.1 | 0.185 | XLOC-041870 | -0.049 |
| kctd8 | 0.184 | tagln2 | -0.048 |
| vat1l | 0.181 | rhag | -0.048 |
| BX294379.1 | 0.181 | foxf1 | -0.047 |
| ldlrad2 | 0.181 | ociad2 | -0.046 |
| faimb | 0.179 | tmem98 | -0.045 |
| CABZ01073033.1 | 0.179 | selenow1 | -0.045 |
| BX323880.1 | 0.176 | col4a6 | -0.045 |
| slc29a1a | 0.174 | mgst3a | -0.045 |
| foxd2 | 0.173 | krt94 | -0.044 |
| LOC101885896 | 0.171 | fn1a | -0.044 |
| CR847898.2 | 0.170 | col1a2 | -0.044 |
| ccdc62 | 0.170 | nkx2.3 | -0.043 |
| dicp3.3 | 0.170 | krt18a.1 | -0.043 |
| lmx1ba | 0.168 | zgc:153704 | -0.043 |
| LOC101884359 | 0.166 | fam133b | -0.043 |