Gene expression UMAP
Other cell groups
all cells |
blastomeres |
PGCs |
endoderm |
axial mesoderm |
muscle  |
mural cells / non-skeletal muscle  |
mesenchyme  |
hematopoietic / vasculature  |
pronephros  |
neural |
spinal cord / glia |
eye |
taste / olfactory |
otic / lateral line |
epidermis |
periderm |
fin |
ionocytes / mucous |
pigment cells |
Expression by stage/cluster
Correlated gene expression
| Positive correlation | Negative correlation | ||
| Gene | r | Gene | r |
| alx1 | 0.373 | nova2 | -0.042 |
| alx4a | 0.275 | her15.1 | -0.039 |
| alx4b | 0.245 | tuba1c | -0.038 |
| si:ch211-256m1.8 | 0.213 | gpm6aa | -0.037 |
| gpnmb | 0.202 | XLOC-003690 | -0.037 |
| CT737162.3 | 0.202 | XLOC-003689 | -0.035 |
| akap12a | 0.201 | msi1 | -0.034 |
| lypc | 0.195 | elavl3 | -0.033 |
| si:ch73-89b15.3 | 0.194 | cldn5a | -0.032 |
| apoda.1 | 0.190 | sox3 | -0.032 |
| csf1a | 0.190 | XLOC-003692 | -0.032 |
| foxl2a | 0.186 | rtn1a | -0.031 |
| unm-sa821 | 0.185 | epb41a | -0.030 |
| cd248b | 0.182 | meis1b | -0.030 |
| defbl1 | 0.178 | tuba1a | -0.030 |
| fhl2b | 0.176 | cadm3 | -0.029 |
| cthrc1a | 0.171 | gpm6ab | -0.029 |
| six1a | 0.171 | her12 | -0.029 |
| fibina | 0.169 | hes6 | -0.029 |
| si:dkey-197i20.6 | 0.169 | epcam | -0.028 |
| cldn11a | 0.166 | fabp7a | -0.028 |
| ltk | 0.166 | abhd6a | -0.028 |
| hsf5 | 0.162 | dla | -0.027 |
| tmem179b | 0.154 | hoxb3a | -0.027 |
| zgc:110789 | 0.154 | stmn1b | -0.027 |
| CR318624.2 | 0.153 | her4.2 | -0.027 |
| si:ch211-38m6.6 | 0.153 | ckbb | -0.026 |
| cdh11 | 0.150 | cspg5a | -0.026 |
| pmp22a | 0.147 | fabp3 | -0.026 |
| LOC103909099 | 0.142 | her2 | -0.026 |
| si:ch211-243a20.3 | 0.142 | her4.1 | -0.026 |
| tgfbi | 0.141 | myt1a | -0.026 |
| krt18b | 0.139 | sox19a | -0.026 |
| pnp4a | 0.138 | sox2 | -0.026 |
| emp3b | 0.136 | tuba8l2 | -0.026 |