Gene expression UMAP
Other cell groups
all cells |
blastomeres |
PGCs |
endoderm |
axial mesoderm |
muscle  |
mural cells / non-skeletal muscle  |
mesenchyme  |
hematopoietic / vasculature  |
pronephros  |
neural |
spinal cord / glia |
eye |
taste / olfactory |
otic / lateral line |
epidermis |
periderm |
fin |
ionocytes / mucous |
pigment cells |
Expression by stage/cluster
Correlated gene expression
| Positive correlation | Negative correlation | ||
| Gene | r | Gene | r |
| sp6 | 0.064 | hmgb1b | -0.025 |
| cldni | 0.059 | tuba1c | -0.025 |
| tspearb | 0.057 | si:ch211-137a8.4 | -0.024 |
| col18a1a | 0.055 | gpm6aa | -0.023 |
| tagln2 | 0.055 | marcksb | -0.023 |
| spaca4l | 0.054 | nova2 | -0.022 |
| flna | 0.053 | elavl3 | -0.021 |
| zgc:101810 | 0.053 | si:ch211-288g17.3 | -0.021 |
| cldn1 | 0.052 | tuba1a | -0.021 |
| lama5 | 0.052 | si:dkey-276j7.1 | -0.020 |
| sparc | 0.052 | hmgb3a | -0.019 |
| krt8 | 0.051 | mdkb | -0.019 |
| tln1 | 0.051 | cadm3 | -0.018 |
| pak2a | 0.049 | epb41a | -0.018 |
| si:dkey-102c8.3 | 0.049 | stmn1b | -0.018 |
| hbegfa | 0.048 | tmpob | -0.018 |
| lamb1a | 0.048 | ckbb | -0.017 |
| pfn1 | 0.048 | fabp3 | -0.017 |
| thy1 | 0.048 | rtn1a | -0.017 |
| tp63 | 0.048 | setb | -0.017 |
| tpm4a | 0.048 | si:dkey-56m19.5 | -0.017 |
| col1a1a | 0.047 | apex1 | -0.016 |
| egfl6 | 0.047 | cspg5a | -0.016 |
| gpr31 | 0.047 | hes6 | -0.016 |
| myh9a | 0.047 | hnrnpub | -0.016 |
| plecb | 0.047 | myt1a | -0.016 |
| zgc:92360 | 0.047 | myt1b | -0.016 |
| ahnak | 0.046 | seta | -0.016 |
| fermt1 | 0.046 | snrpd1 | -0.016 |
| fstl1b | 0.046 | sox11b | -0.016 |
| anxa11b | 0.045 | XLOC-003689 | -0.016 |
| capn2a | 0.045 | XLOC-003692 | -0.016 |
| ecrg4b | 0.045 | chd4a | -0.015 |
| itih5 | 0.045 | ddx39ab | -0.015 |
| lamc1 | 0.045 | dla | -0.015 |