Gene expression UMAP
Other cell groups
all cells |
blastomeres |
PGCs |
endoderm |
axial mesoderm |
muscle  |
mural cells / non-skeletal muscle  |
mesenchyme  |
hematopoietic / vasculature  |
pronephros  |
neural |
spinal cord / glia |
eye |
taste / olfactory |
otic / lateral line |
epidermis |
periderm |
fin |
ionocytes / mucous |
pigment cells |
Expression by stage/cluster
Correlated gene expression
| Positive correlation | Negative correlation | ||
| Gene | r | Gene | r |
| hoxc3a | 0.065 | eef1da | -0.013 |
| hoxb9a | 0.061 | celf2 | -0.012 |
| hoxb8a | 0.055 | bhmt | -0.011 |
| si:ch73-265d7.2 | 0.052 | s100v2 | -0.010 |
| ldlrad2 | 0.050 | rorb | -0.010 |
| hoxc1a | 0.049 | aldob | -0.009 |
| hoxb10a | 0.049 | apoa2 | -0.009 |
| hoxa9a | 0.048 | en2b | -0.009 |
| hoxb1b | 0.048 | fibina | -0.009 |
| hoxb6b | 0.048 | glo1 | -0.009 |
| hoxc9a | 0.048 | krt18b | -0.009 |
| hoxb3a | 0.046 | krt8 | -0.009 |
| hoxd3a | 0.046 | mgst1.2 | -0.009 |
| slc1a3a | 0.046 | otx2b | -0.009 |
| hoxc6b | 0.045 | pvalb1 | -0.009 |
| hoxd9a | 0.043 | sod1 | -0.009 |
| hoxa3a | 0.042 | anxa1a | -0.008 |
| hoxc8a | 0.042 | apoa1b | -0.008 |
| vim | 0.042 | cldnb | -0.008 |
| gfap | 0.041 | cox17 | -0.008 |
| hoxa9b | 0.041 | cpn1 | -0.008 |
| hoxb6a | 0.041 | cthrc1a | -0.008 |
| hoxd12a | 0.041 | fbp1a | -0.008 |
| her12 | 0.039 | fmoda | -0.008 |
| hoxb7a | 0.038 | foxg1b | -0.008 |
| si:ch211-57n23.4 | 0.038 | gadd45ba | -0.008 |
| hoxa10b | 0.037 | lxn | -0.008 |
| hoxd10a | 0.037 | mxra8b | -0.008 |
| CR751227.2 | 0.036 | olfml3b | -0.008 |
| hoxa11b | 0.035 | ppdpfa | -0.008 |
| hoxc4a | 0.035 | pvalb2 | -0.008 |
| hoxb5b | 0.034 | six3b | -0.008 |
| XLOC-003690 | 0.034 | six6b | -0.008 |
| pkd1b | 0.033 | tbx2b | -0.008 |
| XLOC-003689 | 0.033 | zgc:162730 | -0.008 |