| Positive correlation | Negative correlation | ||
| Gene | r | Gene | r |
| msgn1 | 0.323 | fabp3 | -0.111 |
| itm2cb | 0.317 | sparc | -0.101 |
| tbx16l | 0.302 | meis1a | -0.099 |
| her1 | 0.280 | bhmt | -0.094 |
| her12 | 0.274 | vwde | -0.091 |
| her7 | 0.271 | col5a1 | -0.090 |
| fzd10 | 0.264 | emp2 | -0.090 |
| tob1a | 0.238 | alcama | -0.087 |
| hes6 | 0.230 | ahnak | -0.087 |
| hoxd10a | 0.229 | pmp22a | -0.082 |
| tbx16 | 0.217 | tgfbi | -0.078 |
| rbm38 | 0.214 | col1a1b | -0.078 |
| htr5aa | 0.214 | thbs4b | -0.077 |
| vox | 0.214 | eef1da | -0.077 |
| nid2a | 0.214 | col4a1 | -0.076 |
| snai1a | 0.208 | postnb | -0.076 |
| hoxb10a | 0.206 | foxp4 | -0.075 |
| pcdh8 | 0.201 | fxyd6l | -0.073 |
| fgf20a | 0.199 | cd81a | -0.073 |
| dkk1b | 0.191 | cpn1 | -0.073 |
| hoxd12a | 0.190 | pleca | -0.073 |
| fn1a | 0.183 | col1a2 | -0.073 |
| thbs2a | 0.183 | col2a1b | -0.072 |
| plekhn1 | 0.181 | six1b | -0.071 |
| cdx4 | 0.181 | nr2f5 | -0.070 |
| hoxc11a | 0.181 | si:dkey-16p21.8 | -0.069 |
| hoxb7a | 0.180 | her6 | -0.068 |
| rarga | 0.177 | ndrg2 | -0.067 |
| cx43.4 | 0.174 | zfhx3 | -0.067 |
| has2 | 0.174 | ttn.2 | -0.066 |
| BX005254.3 | 0.174 | nme2b.2 | -0.066 |
| aplnra | 0.173 | pkmb | -0.066 |
| zgc:100951 | 0.171 | fmoda | -0.066 |
| cyp26a1 | 0.169 | rdh10a | -0.066 |
| ism1 | 0.169 | pvalb1 | -0.065 |