| Positive correlation | Negative correlation | ||
| Gene | r | Gene | r |
| myhb | 0.388 | apoc1 | -0.094 |
| gfra3 | 0.379 | hoxc3a | -0.090 |
| tnni2a.1 | 0.355 | cdx4 | -0.090 |
| XLOC-019859 | 0.344 | hoxb7a | -0.088 |
| XLOC-007078 | 0.324 | BX927258.1 | -0.088 |
| tcf21 | 0.319 | hes6 | -0.086 |
| stc2b | 0.300 | tcf15 | -0.085 |
| foxl2b | 0.297 | fn1b | -0.084 |
| fhl2a | 0.287 | apoeb | -0.084 |
| dlx4b | 0.284 | hoxb9a | -0.082 |
| ankrd24 | 0.280 | hoxc8a | -0.081 |
| tpm1 | 0.274 | BX001014.2 | -0.079 |
| si:dkeyp-66d1.7 | 0.258 | hspb1 | -0.077 |
| ret | 0.258 | hoxc6b | -0.077 |
| hlx1 | 0.256 | cx43.4 | -0.076 |
| camk2a | 0.250 | dld | -0.075 |
| msc | 0.246 | aldoaa | -0.075 |
| ebf1a | 0.246 | hoxd9a | -0.074 |
| ociad2 | 0.241 | si:ch211-43f4.1 | -0.074 |
| fhl5 | 0.240 | vox | -0.073 |
| tpm4b | 0.240 | tbx16 | -0.071 |
| tnni2a.3 | 0.235 | ppp1r3b | -0.070 |
| isl2a | 0.234 | ved | -0.070 |
| si:dkey-4p15.3 | 0.232 | sp5l | -0.070 |
| dlx3b | 0.232 | msgn1 | -0.070 |
| zgc:66156 | 0.231 | cdx1a | -0.070 |
| lgals2a | 0.227 | hoxa10b | -0.070 |
| naalad2 | 0.227 | polr3gla | -0.069 |
| shox | 0.219 | hoxa9a | -0.069 |
| foxf2a | 0.218 | hoxb10a | -0.069 |
| obscna | 0.212 | optc | -0.069 |
| pitx3 | 0.209 | si:ch211-214j24.10 | -0.069 |
| sync | 0.207 | hoxc9a | -0.068 |
| pdlim3a | 0.207 | nradd | -0.068 |
| FO704758.1 | 0.202 | anp32e | -0.067 |