| Positive correlation | Negative correlation | ||
| Gene | r | Gene | r |
| shox2 | 0.247 | ccng1 | -0.077 |
| lhx9 | 0.219 | id1 | -0.072 |
| lef1 | 0.210 | vamp3 | -0.072 |
| ebf3a | 0.188 | aldob | -0.070 |
| barhl1a | 0.186 | pcna | -0.070 |
| nrn1a | 0.183 | eif4ebp3l | -0.068 |
| stmn1b | 0.182 | npm1a | -0.068 |
| tfap2d | 0.174 | hdlbpa | -0.067 |
| elavl3 | 0.171 | selenoh | -0.067 |
| pou4f1 | 0.164 | banf1 | -0.065 |
| mab21l1 | 0.163 | ccnd1 | -0.064 |
| adcyap1b | 0.162 | epcam | -0.064 |
| fez1 | 0.162 | sdc4 | -0.064 |
| mab21l2 | 0.160 | nop58 | -0.063 |
| ctnnbip1 | 0.156 | tuba8l2 | -0.063 |
| rtn1a | 0.153 | chaf1a | -0.062 |
| gng3 | 0.150 | sox3 | -0.062 |
| tuba1c | 0.150 | akap12b | -0.061 |
| tubb5 | 0.150 | btg2 | -0.061 |
| ebf1a | 0.150 | dkc1 | -0.061 |
| pou4f2 | 0.149 | hspb1 | -0.061 |
| zc4h2 | 0.147 | nop10 | -0.061 |
| hmgb3a | 0.146 | tuba8l | -0.061 |
| lmo3 | 0.146 | cfl1l | -0.059 |
| lhx2b | 0.145 | fbl | -0.059 |
| tmsb | 0.145 | nutf2l | -0.059 |
| gng2 | 0.143 | si:ch211-286b5.5 | -0.059 |
| gpm6ab | 0.141 | atp1b1a | -0.058 |
| celf2 | 0.138 | cd9b | -0.058 |
| pbx3b | 0.136 | rsl1d1 | -0.058 |
| islr2 | 0.135 | fosab | -0.057 |
| chd4a | 0.134 | lig1 | -0.057 |
| si:dkey-276j7.1 | 0.134 | si:ch211-214j24.10 | -0.057 |
| rbfox1 | 0.131 | bzw1b | -0.056 |
| runx1t1 | 0.131 | cdca7b | -0.056 |