| Positive correlation | Negative correlation | ||
| Gene | r | Gene | r |
| shox2 | 0.176 | pcna | -0.035 |
| lef1 | 0.162 | rrm1 | -0.034 |
| en2b | 0.131 | lig1 | -0.033 |
| lmo3 | 0.124 | pax6a | -0.032 |
| lhx9 | 0.114 | CABZ01005379.1 | -0.032 |
| bnc2 | 0.108 | banf1 | -0.032 |
| tmsb | 0.107 | mcm2 | -0.032 |
| pou3f2b | 0.105 | fen1 | -0.032 |
| ebf3a | 0.102 | chaf1a | -0.032 |
| barhl1b | 0.099 | cx43.4 | -0.031 |
| tcf7l2 | 0.096 | mcm6 | -0.030 |
| cd99l2 | 0.094 | mcm7 | -0.030 |
| ecrg4a | 0.092 | mcm5 | -0.030 |
| nova1 | 0.092 | CU929070.1 | -0.030 |
| si:ch73-30b17.2 | 0.092 | ahcy | -0.030 |
| elavl3 | 0.091 | cdca7b | -0.030 |
| scrt1b | 0.089 | pax6b | -0.029 |
| runx1t1 | 0.087 | slbp | -0.029 |
| adcyap1b | 0.087 | nutf2l | -0.029 |
| hapln1a | 0.087 | fzd5 | -0.029 |
| robo1 | 0.086 | mcm4 | -0.029 |
| pou3f3b | 0.086 | nop58 | -0.028 |
| dlx4a | 0.084 | cdca7a | -0.028 |
| LOC101882875 | 0.084 | rpa3 | -0.028 |
| pbx3b | 0.083 | ccnd1 | -0.028 |
| slc17a6a | 0.083 | XLOC-042899 | -0.028 |
| si:ch211-10a23.2 | 0.081 | hells | -0.028 |
| bcl11aa | 0.081 | shmt1 | -0.027 |
| nrn1a | 0.081 | dhfr | -0.027 |
| mcama | 0.081 | hmgb2a | -0.027 |
| pou3f3a | 0.080 | nasp | -0.027 |
| mab21l2 | 0.075 | cad | -0.027 |
| tshz3b | 0.075 | six3b | -0.027 |
| phox2bb | 0.075 | zic2b | -0.026 |
| pou3f2a | 0.074 | dek | -0.026 |