| Positive correlation | Negative correlation | ||
| Gene | r | Gene | r |
| dlx4b | 0.240 | hspb1 | -0.067 |
| tbx1 | 0.219 | BX927258.1 | -0.061 |
| XLOC-019859 | 0.183 | cx43.4 | -0.060 |
| gfra3 | 0.175 | apoc1 | -0.057 |
| XLOC-007078 | 0.175 | apoeb | -0.055 |
| msc | 0.175 | cdx4 | -0.054 |
| dlx3b | 0.174 | tuba8l2 | -0.053 |
| nova2 | 0.156 | ppp1r3b | -0.051 |
| isl2a | 0.155 | si:ch73-281n10.2 | -0.049 |
| myhb | 0.153 | asph | -0.048 |
| tnni2a.1 | 0.149 | zgc:110425 | -0.048 |
| tmeff2b | 0.144 | nop58 | -0.047 |
| lhx9 | 0.143 | ppig | -0.047 |
| stc2b | 0.142 | BX001014.2 | -0.047 |
| ebf1a | 0.141 | aldoaa | -0.046 |
| tuba1c | 0.135 | hoxb7a | -0.046 |
| hlx1 | 0.133 | tbx16 | -0.046 |
| lhx2b | 0.131 | msgn1 | -0.046 |
| gpm6aa | 0.130 | XLOC-032526 | -0.045 |
| stmn1b | 0.128 | vox | -0.045 |
| fhl5 | 0.124 | hes6 | -0.045 |
| LOC108192140 | 0.122 | tcf15 | -0.044 |
| pitx3 | 0.120 | optc | -0.044 |
| dpysl2b | 0.118 | NC-002333.4 | -0.044 |
| lgals2a | 0.117 | cnbpa | -0.044 |
| barhl1b | 0.115 | nhp2 | -0.044 |
| elavl3 | 0.114 | serpinh1b | -0.043 |
| ptmaa | 0.114 | pprc1 | -0.043 |
| ankrd24 | 0.113 | hoxb9a | -0.043 |
| tpm1 | 0.113 | hoxc3a | -0.043 |
| zgc:153426 | 0.111 | CABZ01075068.1 | -0.043 |
| shox2 | 0.110 | cdx1a | -0.043 |
| tpm4b | 0.110 | XLOC-042222 | -0.042 |
| tcf21 | 0.110 | polr3gla | -0.042 |
| gap43 | 0.110 | dkc1 | -0.042 |