| Positive correlation | Negative correlation | ||
| Gene | r | Gene | r |
| hoxb10a | 0.256 | actc1b | -0.117 |
| her1 | 0.235 | ckma | -0.111 |
| hoxd10a | 0.225 | atp2a1 | -0.111 |
| pcdh8 | 0.220 | pabpc4 | -0.110 |
| itm2cb | 0.203 | ckmb | -0.109 |
| ephb3 | 0.199 | tmem38a | -0.107 |
| sall4 | 0.199 | gapdh | -0.107 |
| hnrnpa0l | 0.197 | ak1 | -0.106 |
| her12 | 0.196 | ttn.2 | -0.104 |
| tspan7 | 0.185 | mylpfa | -0.104 |
| zbtb16a | 0.183 | aldoab | -0.102 |
| XLOC-042222 | 0.183 | tnnc2 | -0.100 |
| h3f3a | 0.181 | neb | -0.099 |
| LO016987.2 | 0.180 | pvalb1 | -0.098 |
| her7 | 0.178 | mylz3 | -0.098 |
| fn1b | 0.175 | acta1b | -0.097 |
| hoxa10b | 0.174 | ldb3b | -0.097 |
| hoxa11b | 0.173 | myl1 | -0.097 |
| BX005254.3 | 0.169 | pvalb2 | -0.096 |
| ewsr1b | 0.168 | gamt | -0.096 |
| dut | 0.166 | nme2b.2 | -0.095 |
| greb1 | 0.166 | si:ch73-367p23.2 | -0.095 |
| zgc:56493 | 0.162 | tnnt3a | -0.095 |
| ubc | 0.160 | rplp2 | -0.094 |
| nid2a | 0.160 | ldb3a | -0.094 |
| si:ch1073-429i10.3.1 | 0.159 | si:dkey-16p21.8 | -0.093 |
| hoxa11a | 0.159 | eno1a | -0.093 |
| hoxc3a | 0.158 | srl | -0.093 |
| gnaia | 0.156 | ank1a | -0.093 |
| hes6 | 0.156 | tpma | -0.092 |
| hoxd12a | 0.155 | tnnt3b | -0.092 |
| nfyba | 0.154 | CABZ01078594.1 | -0.091 |
| msgn1 | 0.152 | cav3 | -0.091 |
| phc2a | 0.150 | actn3a | -0.090 |
| hoxc11a | 0.149 | desma | -0.090 |