| Positive correlation | Negative correlation | ||
| Gene | r | Gene | r |
| fgfr2 | 0.061 | hoxb9a | -0.040 |
| CR751602.2 | 0.060 | hoxb10a | -0.035 |
| cd82a | 0.057 | tp53inp2 | -0.034 |
| plp1a | 0.053 | ptmaa | -0.033 |
| cyp26b1 | 0.053 | hoxc3a | -0.032 |
| wnt7aa | 0.051 | hoxa9a | -0.032 |
| notch3 | 0.049 | hoxd9a | -0.030 |
| ntn1a | 0.048 | hoxa10b | -0.030 |
| tnc | 0.048 | myt1b | -0.030 |
| metrn | 0.048 | hoxb8a | -0.029 |
| sfrp5 | 0.046 | hoxb7a | -0.028 |
| fgfr3 | 0.046 | vim | -0.028 |
| sox3 | 0.046 | hoxc9a | -0.028 |
| BX649385.1 | 0.046 | hoxa11b | -0.028 |
| sulf2b | 0.045 | nhlh2 | -0.028 |
| egfl6 | 0.045 | myt1a | -0.028 |
| LOC108180722 | 0.045 | hoxd10a | -0.027 |
| celf2 | 0.045 | LOC100537384 | -0.027 |
| XLOC-012973 | 0.045 | hoxd12a | -0.026 |
| metrnla | 0.044 | pik3r3b | -0.025 |
| mmp19 | 0.044 | hoxc12b | -0.025 |
| msi1 | 0.044 | elavl3 | -0.025 |
| cspg5a | 0.044 | hoxd3a | -0.025 |
| lrrn1 | 0.043 | ldlrad2 | -0.024 |
| sox9a | 0.043 | cdx4 | -0.024 |
| fabp7a | 0.043 | robo3 | -0.023 |
| CU634008.1 | 0.043 | hoxc13a | -0.023 |
| ptprz1b | 0.043 | hoxd11a | -0.023 |
| nr2f1b | 0.042 | hoxb6a | -0.023 |
| her6 | 0.042 | smkr1 | -0.022 |
| LOC101886742 | 0.042 | hoxc11b | -0.022 |
| pcdh19 | 0.042 | hoxa9b | -0.022 |
| CR848047.1 | 0.041 | hoxc4a | -0.022 |
| rgma | 0.041 | dlb | -0.022 |
| sox2 | 0.041 | thsd7aa | -0.022 |