Gene expression UMAP
Other cell groups
all cells |
blastomeres |
PGCs |
endoderm |
axial mesoderm |
muscle  |
mural cells / non-skeletal muscle  |
mesenchyme  |
hematopoietic / vasculature  |
pronephros  |
neural |
spinal cord / glia |
eye |
taste / olfactory |
otic / lateral line |
epidermis |
periderm |
fin |
ionocytes / mucous |
pigment cells |
Expression by stage/cluster
Correlated gene expression
| Positive correlation | Negative correlation | ||
| Gene | r | Gene | r |
| nkx2.4b | 0.234 | meis1b | -0.033 |
| nkx2.4a | 0.211 | ptmab | -0.030 |
| si:ch211-197l9.5 | 0.166 | hoxb3a | -0.028 |
| LOC110439848 | 0.156 | hoxb9a | -0.027 |
| nkx2.1 | 0.137 | calm2a | -0.026 |
| wnt8b | 0.135 | si:ch211-137a8.4 | -0.025 |
| ctsbb | 0.123 | hoxc3a | -0.025 |
| ccl44 | 0.101 | tuba1a | -0.024 |
| fezf2 | 0.098 | tmsb4x | -0.024 |
| sema3ab | 0.092 | tubb2b | -0.024 |
| CABZ01078606.1 | 0.089 | hoxd3a | -0.023 |
| gja5a | 0.088 | tmeff1b | -0.023 |
| prdx1 | 0.088 | marcksl1b | -0.022 |
| si:dkey-29j8.3 | 0.086 | elavl3 | -0.022 |
| id3 | 0.085 | hoxb8a | -0.021 |
| BX470242.1 | 0.081 | si:ch73-265d7.2 | -0.021 |
| pitx2 | 0.079 | hoxb1b | -0.021 |
| emx2 | 0.079 | hapln1a | -0.021 |
| XLOC-002497 | 0.076 | hnrnpaba | -0.020 |
| si:dkey-37m8.3 | 0.070 | hoxa9a | -0.020 |
| kif25 | 0.069 | hoxc9a | -0.020 |
| zgc:100951 | 0.068 | nucks1a | -0.020 |
| CR376740.2 | 0.067 | ubc | -0.020 |
| XLOC-041002 | 0.066 | cfl1 | -0.019 |
| tdrd7b | 0.066 | gfap | -0.019 |
| SP5 (1 of many) | 0.066 | hoxd9a | -0.019 |
| LOC100333290 | 0.064 | hoxb10a | -0.019 |
| herc7 | 0.064 | hoxa9b | -0.019 |
| ccka | 0.060 | hoxb7a | -0.019 |
| LOC108191313 | 0.059 | tmsb | -0.019 |
| wif1 | 0.059 | meis2a | -0.019 |
| dapk2b | 0.059 | hoxa10b | -0.019 |
| itgbl1 | 0.057 | tuba1c | -0.018 |
| ms4a17a.8 | 0.057 | gng3 | -0.018 |
| mical2a | 0.057 | cirbpb | -0.018 |