Gene expression UMAP
Other cell groups
all cells |
blastomeres |
PGCs |
endoderm |
axial mesoderm |
muscle  |
mural cells / non-skeletal muscle  |
mesenchyme  |
hematopoietic / vasculature  |
pronephros  |
neural |
spinal cord / glia |
eye |
taste / olfactory |
otic / lateral line |
epidermis |
periderm |
fin |
ionocytes / mucous |
pigment cells |
Expression by stage/cluster
Correlated gene expression
| Positive correlation | Negative correlation | ||
| Gene | r | Gene | r |
| nkx2.4b | 0.242 | krt8 | -0.015 |
| nkx2.4a | 0.220 | meis1b | -0.015 |
| nkx2.1 | 0.130 | pmp22a | -0.015 |
| fezf2 | 0.084 | tuba8l2 | -0.015 |
| prdx1 | 0.061 | zgc:162730 | -0.015 |
| slc1a3b | 0.054 | ahnak | -0.013 |
| emx2 | 0.053 | col1a2 | -0.013 |
| id3 | 0.052 | fkbp7 | -0.013 |
| sox1b | 0.052 | gas1a | -0.013 |
| LOC108191313 | 0.049 | anxa1a | -0.012 |
| il34 | 0.044 | capns1a | -0.012 |
| bsx | 0.042 | hoxb3a | -0.012 |
| ptprn2 | 0.042 | krt18a.1 | -0.012 |
| wnt8b | 0.040 | lrrc17 | -0.012 |
| CU467822.1 | 0.038 | meis1a | -0.012 |
| shha | 0.037 | pfn1 | -0.012 |
| nell2a | 0.036 | prdx5 | -0.012 |
| sox13 | 0.036 | col5a1 | -0.012 |
| wnt7bb | 0.036 | abracl | -0.011 |
| nrp2b | 0.035 | aldob | -0.011 |
| sox19a | 0.035 | anxa4 | -0.011 |
| si:dkeyp-110a12.4 | 0.034 | cebpb | -0.011 |
| XLOC-003690 | 0.034 | cfl1l | -0.011 |
| msi1 | 0.033 | col1a1a | -0.011 |
| ntrk2a | 0.032 | col1a1b | -0.011 |
| sox2 | 0.032 | col2a1b | -0.011 |
| wnt16 | 0.032 | emp2 | -0.011 |
| her15.1 | 0.032 | epcam | -0.011 |
| SP5 (1 of many) | 0.032 | fxyd6l | -0.011 |
| foxd2 | 0.031 | hdlbpa | -0.011 |
| nr2e1 | 0.031 | krt18b | -0.011 |
| tbx3a | 0.031 | myl12.1 | -0.011 |
| XLOC-003689 | 0.031 | net1 | -0.011 |
| her4.1 | 0.030 | pax3a | -0.011 |
| rx3 | 0.030 | pleca | -0.011 |