Gene expression UMAP
Other cell groups
all cells |
blastomeres |
PGCs |
endoderm |
axial mesoderm |
muscle  |
mural cells / non-skeletal muscle  |
mesenchyme  |
hematopoietic / vasculature  |
pronephros  |
neural |
spinal cord / glia |
eye |
taste / olfactory |
otic / lateral line |
epidermis |
periderm |
fin |
ionocytes / mucous |
pigment cells |
Expression by stage/cluster
Correlated gene expression
| Positive correlation | Negative correlation | ||
| Gene | r | Gene | r |
| LOC103909333 | 0.166 | meis1b | -0.030 |
| ftr30 | 0.142 | hoxb3a | -0.029 |
| BX293559.2 | 0.133 | hoxc3a | -0.026 |
| erlin2 | 0.110 | hoxb9a | -0.025 |
| otx2a | 0.104 | hoxb8a | -0.023 |
| dmrta2 | 0.100 | hoxd3a | -0.022 |
| nr2f1b | 0.080 | pvalb2 | -0.022 |
| CT583728.14 | 0.080 | znf503 | -0.021 |
| FP085399.5 | 0.077 | hoxc9a | -0.021 |
| cyp2p9 | 0.073 | mdka | -0.021 |
| CR391910.2 | 0.064 | hoxa9a | -0.020 |
| tmprss3a | 0.062 | robo3 | -0.019 |
| LOC108180805 | 0.060 | hoxa3a | -0.019 |
| ftr22 | 0.060 | vim | -0.019 |
| helt | 0.059 | hoxb7a | -0.019 |
| irx1a | 0.058 | hoxd9a | -0.019 |
| sfrp5 | 0.058 | hoxa9b | -0.019 |
| si:dkey-31g6.4 | 0.058 | dnmt3ab | -0.019 |
| LOC110438076 | 0.058 | hoxb1b | -0.018 |
| CR751602.2 | 0.056 | gng3 | -0.018 |
| si:ch211-67e16.11 | 0.055 | si:ch73-386h18.1 | -0.018 |
| otx1 | 0.055 | myt1b | -0.018 |
| foxa1 | 0.054 | pop7 | -0.018 |
| irx2a | 0.051 | map2 | -0.018 |
| gorasp1b | 0.051 | stmn1b | -0.018 |
| pdlim3a | 0.051 | hoxa10b | -0.018 |
| FO834850.1 | 0.050 | hoxb10a | -0.018 |
| si:dkey-30c15.13 | 0.050 | eif4ebp1 | -0.018 |
| zgc:194629 | 0.050 | syt2a | -0.018 |
| hephl1a | 0.050 | elavl3 | -0.018 |
| pdha1b | 0.049 | elavl4 | -0.018 |
| foxa | 0.048 | hoxc8a | -0.018 |
| ntn1a | 0.048 | stx1b | -0.018 |
| zgc:101100 | 0.047 | alcama | -0.017 |
| zbtb16a | 0.045 | draxin | -0.017 |