Gene expression UMAP
Other cell groups
all cells |
blastomeres |
PGCs |
endoderm |
axial mesoderm |
muscle  |
mural cells / non-skeletal muscle  |
mesenchyme  |
hematopoietic / vasculature  |
pronephros  |
neural |
spinal cord / glia |
eye |
taste / olfactory |
otic / lateral line |
epidermis |
periderm |
fin |
ionocytes / mucous |
pigment cells |
Expression by stage/cluster
Correlated gene expression
| Positive correlation | Negative correlation | ||
| Gene | r | Gene | r |
| ccl34b.1 | 0.191 | nova2 | -0.018 |
| cx32.2 | 0.182 | tuba1c | -0.018 |
| mpeg1.1 | 0.182 | elavl3 | -0.017 |
| havcr1 | 0.180 | hmgb3a | -0.017 |
| cmklr1 | 0.178 | gpm6aa | -0.016 |
| lgals3bpb | 0.176 | rtn1a | -0.015 |
| si:dkey-5n18.1 | 0.174 | tuba1a | -0.015 |
| LOC108180725 | 0.173 | fabp3 | -0.014 |
| itgae.1 | 0.172 | stmn1b | -0.014 |
| BX539325.1 | 0.167 | tmsb | -0.014 |
| si:ch73-158p21.3 | 0.156 | gpm6ab | -0.013 |
| si:dkey-148a17.6 | 0.155 | hmgb1b | -0.013 |
| rnaset2l | 0.154 | myt1a | -0.013 |
| cxcr3.2 | 0.152 | si:dkey-276j7.1 | -0.013 |
| marco | 0.151 | atp6v0cb | -0.012 |
| havcr2 | 0.150 | epb41a | -0.012 |
| ccl35.1 | 0.149 | myt1b | -0.012 |
| CU499330.1 | 0.149 | rnasekb | -0.012 |
| spi1a | 0.149 | sox11b | -0.012 |
| mfap4 | 0.148 | tmeff1b | -0.012 |
| adgrg3 | 0.143 | tubb5 | -0.012 |
| c1qc | 0.142 | gng3 | -0.011 |
| fcer1gl | 0.138 | krt4 | -0.011 |
| c1qb | 0.136 | marcksb | -0.011 |
| XLOC-005448 | 0.136 | si:ch211-137a8.4 | -0.011 |
| BX649485.1 | 0.135 | sncb | -0.011 |
| grna | 0.129 | ank2b | -0.010 |
| lgals9l1 | 0.129 | cadm3 | -0.010 |
| LOC101882264 | 0.129 | chd4a | -0.010 |
| BX649485.2 | 0.128 | cspg5a | -0.010 |
| si:zfos-1069f5.1 | 0.128 | CU467822.1 | -0.010 |
| irf8 | 0.127 | cyt1 | -0.010 |
| si:ch211-1o7.3 | 0.127 | cyt1l | -0.010 |
| CABZ01118270.1 | 0.127 | dla | -0.010 |
| CABZ01073834.1 | 0.126 | dlb | -0.010 |