Gene expression UMAP
Other cell groups
all cells |
blastomeres |
PGCs |
endoderm |
axial mesoderm |
muscle  |
mural cells / non-skeletal muscle  |
mesenchyme  |
hematopoietic / vasculature  |
pronephros  |
neural |
spinal cord / glia |
eye |
taste / olfactory |
otic / lateral line |
epidermis |
periderm |
fin |
ionocytes / mucous |
pigment cells |
Expression by stage/cluster
Correlated gene expression
| Positive correlation | Negative correlation | ||
| Gene | r | Gene | r |
| mpeg1.1 | 0.512 | fabp3 | -0.053 |
| havcr1 | 0.509 | hmgb1b | -0.048 |
| si:dkey-5n18.1 | 0.491 | mdka | -0.048 |
| cx32.2 | 0.483 | pfn2l | -0.042 |
| CU499330.1 | 0.479 | hmgb3a | -0.040 |
| cmklr1 | 0.470 | tspan7 | -0.038 |
| mfap4 | 0.467 | marcksb | -0.037 |
| cxcr3.2 | 0.458 | si:ch211-288g17.3 | -0.037 |
| rnaset2l | 0.449 | her15.1 | -0.037 |
| si:ch211-147m6.1 | 0.441 | jpt1b | -0.035 |
| fcer1gl | 0.438 | apex1 | -0.034 |
| spi1a | 0.433 | h2afva | -0.034 |
| LOC108180725 | 0.432 | si:ch211-137a8.4 | -0.034 |
| c1qb | 0.430 | vdac1 | -0.034 |
| lgals3bpb | 0.426 | cx43.4 | -0.033 |
| itgae.1 | 0.425 | hnrnpa0a | -0.033 |
| si:ch211-194m7.3 | 0.423 | id1 | -0.033 |
| ccl34a.4 | 0.420 | sparc | -0.033 |
| marco | 0.417 | foxp4 | -0.032 |
| laptm5 | 0.413 | tuba1a | -0.032 |
| ccl34b.1 | 0.413 | pbx4 | -0.031 |
| si:dkey-148a17.6 | 0.403 | tmeff1b | -0.031 |
| si:ch211-1o7.3 | 0.385 | tuba1c | -0.031 |
| spi1b | 0.385 | XLOC-003690 | -0.031 |
| cd83 | 0.373 | nova2 | -0.030 |
| coro1a | 0.373 | si:ch73-46j18.5 | -0.030 |
| zgc:173915 | 0.368 | boc | -0.029 |
| si:ch211-102c2.4 | 0.363 | cdh2 | -0.029 |
| c1qc | 0.362 | meis1b | -0.029 |
| mrc1b | 0.354 | mex3b | -0.029 |
| FERMT3 (1 of many) | 0.352 | nme3 | -0.029 |
| grna | 0.345 | nucks1a | -0.029 |
| csf1rb | 0.344 | stmn1a | -0.029 |
| ccr9a | 0.342 | XLOC-003689 | -0.029 |
| zgc:64051 | 0.341 | mdkb | -0.028 |