Gene expression UMAP
Other cell groups
all cells |
blastomeres |
PGCs |
endoderm |
axial mesoderm |
muscle  |
mural cells / non-skeletal muscle  |
mesenchyme  |
hematopoietic / vasculature  |
pronephros  |
neural |
spinal cord / glia |
eye |
taste / olfactory |
otic / lateral line |
epidermis |
periderm |
fin |
ionocytes / mucous |
pigment cells |
Expression by stage/cluster
Correlated gene expression
| Positive correlation | Negative correlation | ||
| Gene | r | Gene | r |
| fcer1gl | 0.511 | hmgb1b | -0.051 |
| spi1b | 0.510 | fabp3 | -0.048 |
| laptm5 | 0.492 | mdka | -0.045 |
| cxcr3.2 | 0.486 | hmgb3a | -0.044 |
| cmklr1 | 0.474 | pfn2l | -0.044 |
| spi1a | 0.468 | jpt1b | -0.042 |
| cx32.2 | 0.463 | marcksb | -0.039 |
| mpeg1.1 | 0.460 | nova2 | -0.039 |
| adgrg3 | 0.458 | tuba1c | -0.038 |
| itgb2 | 0.456 | tuba1a | -0.036 |
| LOC108180725 | 0.454 | mdkb | -0.035 |
| FERMT3 (1 of many) | 0.453 | si:ch211-137a8.4 | -0.035 |
| coro1a | 0.452 | si:ch73-46j18.5 | -0.035 |
| il1b | 0.448 | tspan7 | -0.035 |
| si:ch211-102c2.4 | 0.445 | foxp4 | -0.034 |
| zgc:64051 | 0.441 | hnrnpa0a | -0.034 |
| havcr1 | 0.439 | id1 | -0.034 |
| CU499330.1 | 0.436 | sparc | -0.034 |
| si:zfos-741a10.3 | 0.436 | tmeff1b | -0.034 |
| myo1f | 0.435 | vdac1 | -0.034 |
| ptprc | 0.427 | her15.1 | -0.034 |
| rnaset2l | 0.426 | gpm6aa | -0.032 |
| si:ch211-243a20.4 | 0.425 | si:ch211-133n4.4 | -0.032 |
| glipr1a | 0.421 | si:ch211-288g17.3 | -0.032 |
| itgae.2 | 0.421 | apex1 | -0.031 |
| gpr183a | 0.419 | h1f0 | -0.031 |
| lcp1 | 0.418 | pbx4 | -0.031 |
| LOC100536213 | 0.418 | rtn1a | -0.031 |
| si:dkey-148a17.6 | 0.415 | fam168a | -0.030 |
| nrros | 0.412 | meis1b | -0.030 |
| itgae.1 | 0.411 | tubb5 | -0.030 |
| si:dkey-102g19.3 | 0.411 | cdh2 | -0.029 |
| ncf1 | 0.411 | cx43.4 | -0.029 |
| plek | 0.409 | h2afva | -0.029 |
| CT027744.2 | 0.405 | nkain1 | -0.029 |