| Positive correlation | Negative correlation | ||
| Gene | r | Gene | r |
| fgf22 | 0.350 | meis1b | -0.070 |
| foxg1a | 0.347 | marcksl1b | -0.067 |
| fezf2 | 0.261 | hoxb3a | -0.059 |
| wnt7ba | 0.239 | hoxb9a | -0.053 |
| lhx2b | 0.232 | hoxc3a | -0.051 |
| efnb2a | 0.231 | hoxb8a | -0.049 |
| c1qtnf5 | 0.205 | hoxb1b | -0.047 |
| elfn1b | 0.169 | si:ch73-386h18.1 | -0.046 |
| hs3st1l2 | 0.166 | si:ch73-265d7.2 | -0.046 |
| znf296 | 0.164 | zc4h2 | -0.045 |
| itih1 | 0.157 | hoxa3a | -0.044 |
| aqp1a.1 | 0.155 | hoxd3a | -0.042 |
| cdon | 0.150 | hoxd9a | -0.042 |
| grm2b | 0.147 | hoxb7a | -0.042 |
| ntrk2a | 0.141 | zfhx3 | -0.041 |
| fam69c | 0.140 | elavl3 | -0.041 |
| slc1a3b | 0.140 | nova1 | -0.041 |
| emx2 | 0.136 | myt1b | -0.040 |
| hesx1 | 0.127 | snap25a | -0.040 |
| wscd1b | 0.123 | baz2ba | -0.040 |
| otx1 | 0.115 | hoxa9a | -0.039 |
| zgc:165461 | 0.113 | tubb5 | -0.039 |
| gas1a | 0.111 | pik3r3b | -0.039 |
| dmrta2 | 0.111 | zgc:100920 | -0.039 |
| efnb1 | 0.109 | gng3 | -0.039 |
| LOC103909284 | 0.107 | nr2f6b | -0.039 |
| XLOC-005056 | 0.106 | hoxc8a | -0.038 |
| FAT4 | 0.106 | stxbp1a | -0.038 |
| LO018231.1 | 0.106 | pbx4 | -0.038 |
| fam19a5a | 0.104 | calm1a | -0.038 |
| nfixb | 0.104 | hoxc9a | -0.038 |
| capn12 | 0.103 | hoxc1a | -0.037 |
| s1pr5a | 0.103 | calm2a | -0.037 |
| ca9 | 0.102 | epha4b | -0.037 |
| rprma | 0.102 | serinc5 | -0.037 |