| Positive correlation | Negative correlation | ||
| Gene | r | Gene | r |
| BX005254.3 | 0.739 | gapdhs | -0.319 |
| apoc1 | 0.702 | krt91 | -0.298 |
| hoxb10a | 0.690 | aqp3a | -0.295 |
| hoxc8a | 0.673 | eef1da | -0.288 |
| hoxb7a | 0.656 | col1a1b | -0.287 |
| hoxb9a | 0.649 | rplp2 | -0.286 |
| hoxd9a | 0.636 | anxa1a | -0.285 |
| emx2 | 0.628 | capns1a | -0.282 |
| hoxc3a | 0.585 | col1a2 | -0.277 |
| insl5a | 0.576 | col1a1a | -0.275 |
| BX927258.1 | 0.575 | krtt1c19e | -0.271 |
| hoxc6b | 0.572 | sparc | -0.268 |
| inaa | 0.545 | cotl1 | -0.265 |
| asb11 | 0.544 | anxa2a | -0.255 |
| crabp2a | 0.543 | postnb | -0.254 |
| LOC101882251 | 0.531 | rbp4 | -0.253 |
| prickle1a | 0.524 | s100a10b | -0.251 |
| hoxd10a | 0.514 | capgb | -0.241 |
| sp8b | 0.514 | si:dkey-33c14.3 | -0.232 |
| hspb1 | 0.512 | col14a1b | -0.225 |
| nradd | 0.506 | cxl34b.11 | -0.222 |
| mllt3 | 0.500 | rps29 | -0.220 |
| hoxa10b | 0.500 | si:ch211-39i22.1 | -0.218 |
| vcana | 0.497 | pycard | -0.218 |
| XLOC-032526 | 0.489 | ahcy | -0.218 |
| znfl2a | 0.488 | krt5 | -0.215 |
| XLOC-001603 | 0.480 | epgn | -0.212 |
| hoxd12a | 0.477 | pvalb1 | -0.208 |
| tpm4a | 0.470 | ak1 | -0.208 |
| hoxa9a | 0.470 | itgb4 | -0.208 |
| tmeff1b | 0.469 | s100v1 | -0.208 |
| lin28a | 0.461 | s100v2 | -0.205 |
| hoxd11a | 0.460 | zgc:136930 | -0.203 |
| hoxa9b | 0.460 | aep1 | -0.201 |
| hoxd3a | 0.456 | pvalb2 | -0.201 |