| Positive correlation | Negative correlation | ||
| Gene | r | Gene | r |
| hoxd10a | 0.189 | gapdh | -0.116 |
| her1 | 0.187 | ckma | -0.116 |
| hoxb10a | 0.175 | actc1b | -0.115 |
| itm2cb | 0.171 | ckmb | -0.111 |
| hoxd12a | 0.171 | atp2a1 | -0.109 |
| hoxa11a | 0.164 | tnnc2 | -0.108 |
| her12 | 0.163 | neb | -0.107 |
| zbtb16a | 0.161 | ak1 | -0.106 |
| fbln1 | 0.159 | aldoab | -0.104 |
| her7 | 0.147 | ldb3b | -0.104 |
| ephb3 | 0.146 | acta1b | -0.102 |
| hoxc11a | 0.143 | ttn.2 | -0.102 |
| XLOC-042222 | 0.142 | actn3a | -0.102 |
| hoxa11b | 0.141 | CABZ01078594.1 | -0.102 |
| hoxa10b | 0.138 | si:ch73-367p23.2 | -0.102 |
| sall4 | 0.137 | tmem38a | -0.101 |
| hsp90ab1 | 0.137 | ttn.1 | -0.101 |
| h3f3a | 0.136 | mylpfa | -0.100 |
| hnrnpa0l | 0.136 | actn3b | -0.100 |
| fzd10 | 0.134 | tpma | -0.099 |
| hoxd11a | 0.133 | si:ch211-266g18.10 | -0.099 |
| greb1 | 0.133 | mybphb | -0.099 |
| rarga | 0.132 | cox7c | -0.099 |
| COX7A2 (1 of many) | 0.131 | smyd1a | -0.098 |
| LO016987.2 | 0.129 | nme2b.2 | -0.098 |
| zgc:162939 | 0.129 | myom1a | -0.098 |
| ppib | 0.128 | tmod4 | -0.097 |
| BX005254.3 | 0.127 | pgam2 | -0.097 |
| tubb4b | 0.126 | tnnt3a | -0.097 |
| tbx16l | 0.126 | casq2 | -0.096 |
| nid2a | 0.126 | ank1a | -0.096 |
| ssr3 | 0.125 | hhatla | -0.096 |
| hoxc10a | 0.124 | srl | -0.096 |
| ubc | 0.124 | desma | -0.095 |
| pcdh8 | 0.122 | cav3 | -0.095 |