| Positive correlation | Negative correlation | ||
| Gene | r | Gene | r |
| cdx4 | 0.524 | gapdhs | -0.215 |
| BX005254.3 | 0.446 | krt91 | -0.213 |
| hoxb10a | 0.436 | krtt1c19e | -0.192 |
| hoxb7a | 0.431 | capns1a | -0.191 |
| hoxb9a | 0.422 | eef1da | -0.185 |
| hoxc8a | 0.413 | aqp3a | -0.182 |
| apoc1 | 0.407 | rplp2 | -0.182 |
| insl5a | 0.404 | col1a1b | -0.181 |
| vcana | 0.398 | anxa1a | -0.180 |
| emx2 | 0.393 | anxa2a | -0.176 |
| hoxc3a | 0.382 | col1a2 | -0.171 |
| LOC101882251 | 0.375 | si:dkey-33c14.3 | -0.169 |
| hoxd9a | 0.369 | col1a1a | -0.168 |
| sp8b | 0.359 | rbp4 | -0.168 |
| crabp2a | 0.357 | cotl1 | -0.162 |
| hoxc6b | 0.356 | capgb | -0.161 |
| mllt3 | 0.343 | col14a1b | -0.156 |
| hoxd10a | 0.341 | postnb | -0.155 |
| nradd | 0.337 | sparc | -0.153 |
| b3gnt7 | 0.331 | cxl34b.11 | -0.152 |
| hoxd3a | 0.325 | ahcy | -0.152 |
| hoxa10b | 0.319 | zgc:136930 | -0.151 |
| BX927258.1 | 0.318 | rps29 | -0.146 |
| asb11 | 0.318 | krt5 | -0.146 |
| cdaa | 0.314 | pycard | -0.145 |
| lin28a | 0.309 | si:ch211-39i22.1 | -0.144 |
| tpm4a | 0.305 | epgn | -0.143 |
| hoxa9a | 0.305 | lgals1l1 | -0.142 |
| ptgs1 | 0.304 | si:dkey-183i3.5 | -0.141 |
| hoxa9b | 0.300 | aep1 | -0.139 |
| sp8a | 0.298 | s100a10b | -0.139 |
| tmeff1b | 0.296 | ak1 | -0.137 |
| ccdc3a | 0.292 | s100v1 | -0.136 |
| hoxd12a | 0.287 | pvalb1 | -0.136 |
| inaa | 0.282 | s100v2 | -0.135 |