| Positive correlation | Negative correlation | ||
| Gene | r | Gene | r |
| pax2a | 0.324 | prdx2 | -0.051 |
| lbx2 | 0.288 | blvrb | -0.048 |
| cdx4 | 0.271 | hbae1.1 | -0.045 |
| hoxb10a | 0.267 | tspo | -0.045 |
| vox | 0.264 | mcl1a | -0.044 |
| tbx16 | 0.237 | tmem14ca | -0.044 |
| wu:fb97g03 | 0.234 | hbbe1.3 | -0.044 |
| hoxc3a | 0.227 | pvalb1 | -0.043 |
| cdx1a | 0.225 | hbae3 | -0.041 |
| tbxtb | 0.221 | fam210b | -0.040 |
| hnf1bb | 0.215 | gpx1a | -0.040 |
| cx43.4 | 0.203 | hbbe1.1 | -0.039 |
| her7 | 0.202 | pvalb2 | -0.039 |
| mnx1 | 0.198 | aqp1a.1 | -0.039 |
| si:dkey-261j4.5 | 0.193 | hbae1.3 | -0.038 |
| hes6 | 0.193 | zgc:163057 | -0.038 |
| hoxb7a | 0.192 | rpl37 | -0.038 |
| BX005254.3 | 0.190 | cahz | -0.038 |
| BX927258.1 | 0.178 | cbr1l | -0.038 |
| hoxc6b | 0.178 | hbbe2 | -0.037 |
| hspb1 | 0.174 | hemgn | -0.037 |
| BX927327.1 | 0.172 | coro1a | -0.037 |
| lsp1 | 0.167 | srgn | -0.037 |
| wnt5b | 0.166 | eef1da | -0.037 |
| vcana | 0.165 | alas2 | -0.037 |
| hoxb9a | 0.164 | zgc:163080 | -0.037 |
| dact2 | 0.158 | arhgdig | -0.036 |
| her1 | 0.156 | clic2 | -0.035 |
| XLOC-015209 | 0.155 | cebpb | -0.035 |
| dnaaf4 | 0.155 | arpc1b | -0.035 |
| wnt2bb | 0.154 | sod1 | -0.034 |
| mnx2b | 0.154 | laptm5 | -0.034 |
| fgf10b | 0.154 | gmfg | -0.034 |
| fbln1 | 0.152 | pfn1 | -0.034 |
| apela | 0.150 | eno3 | -0.034 |