Gene expression UMAP
Other cell groups
all cells |
blastomeres |
PGCs |
endoderm |
axial mesoderm |
muscle  |
mural cells / non-skeletal muscle  |
mesenchyme  |
hematopoietic / vasculature  |
pronephros  |
neural |
spinal cord / glia |
eye |
taste / olfactory |
otic / lateral line |
epidermis |
periderm |
fin |
ionocytes / mucous |
pigment cells |
Expression by stage/cluster
Correlated gene expression
| Positive correlation | Negative correlation | ||
| Gene | r | Gene | r |
| hoxd13a | 0.197 | krt91 | -0.059 |
| hoxc13b | 0.187 | gapdhs | -0.054 |
| hoxc13a | 0.183 | krtt1c19e | -0.053 |
| si:dkey-202e22.2 | 0.182 | capns1a | -0.052 |
| hoxd12a | 0.182 | si:dkey-33c14.3 | -0.051 |
| emx3 | 0.163 | rplp2 | -0.048 |
| apela | 0.159 | ahcy | -0.047 |
| cxcr4a | 0.156 | anxa1a | -0.047 |
| cdaa | 0.154 | cxl34b.11 | -0.047 |
| fibinb | 0.147 | rbp4 | -0.045 |
| hoxc10a | 0.144 | ak1 | -0.045 |
| hoxb10a | 0.144 | capgb | -0.044 |
| pimr132 | 0.143 | pvalb1 | -0.044 |
| hoxd10a | 0.140 | zgc:136930 | -0.043 |
| hoxa11b | 0.138 | igfbp7 | -0.043 |
| hoxa11a | 0.138 | ptmaa | -0.043 |
| nkx1.2la | 0.137 | si:ch211-39i22.1 | -0.043 |
| hoxa10b | 0.134 | epgn | -0.042 |
| ntd5 | 0.133 | krt5 | -0.042 |
| LOC110439405 | 0.132 | pvalb2 | -0.040 |
| XLOC-042222 | 0.131 | col14a1b | -0.040 |
| ccdc3a | 0.129 | rhbg | -0.039 |
| pimr135 | 0.129 | si:dkey-183i3.5 | -0.039 |
| rgs3a | 0.127 | ucp2 | -0.039 |
| hoxb7a | 0.126 | caspb | -0.038 |
| emx2 | 0.125 | lgals1l1 | -0.037 |
| hoxc11b | 0.123 | wu:fa03e10 | -0.036 |
| rbpjl | 0.121 | anxa2a | -0.036 |
| CR933839.1 | 0.120 | zgc:77439 | -0.036 |
| sb:cb1058 | 0.120 | si:ch211-105c13.3 | -0.035 |
| FP236454.1 | 0.119 | aqp3a | -0.035 |
| col14a1a | 0.116 | stmn1a | -0.035 |
| fstl1a | 0.115 | itgb1b.2 | -0.035 |
| BX001014.2 | 0.115 | meis1b | -0.035 |
| hoxc11a | 0.113 | actc1b | -0.034 |