| Positive correlation | Negative correlation | ||
| Gene | r | Gene | r |
| itm2cb | 0.143 | zgc:92429 | -0.072 |
| rarga | 0.127 | si:ch211-131k2.3 | -0.071 |
| hoxb10a | 0.119 | myog | -0.069 |
| her1 | 0.117 | zgc:92518 | -0.069 |
| her12 | 0.112 | rbfox1l | -0.068 |
| hoxd10a | 0.111 | klhl41b | -0.068 |
| tob1a | 0.110 | zgc:101853 | -0.067 |
| tbx16l | 0.108 | smyd1b | -0.067 |
| msgn1 | 0.108 | mss51 | -0.066 |
| olfm1b | 0.105 | tnni2b.1 | -0.066 |
| her7 | 0.105 | fxr2 | -0.065 |
| hes6 | 0.102 | jam2a | -0.063 |
| rem1 | 0.099 | mafaa | -0.061 |
| ism1 | 0.098 | mafbb | -0.061 |
| stxbp1a | 0.091 | cygb1 | -0.060 |
| hoxd11a | 0.091 | si:dkey-151g10.6 | -0.058 |
| snap25b | 0.090 | rpl29 | -0.057 |
| greb1 | 0.090 | hjv | -0.057 |
| hoxa11a | 0.090 | smyd2a | -0.057 |
| atpv0e2 | 0.090 | rps28 | -0.057 |
| ptmaa | 0.089 | gatm | -0.056 |
| hoxa11b | 0.088 | flncb | -0.056 |
| pvalb6 | 0.088 | hsp90aa1.1 | -0.056 |
| hoxa10b | 0.087 | rps12 | -0.055 |
| fzd10 | 0.087 | fbxl22 | -0.055 |
| BX005254.3 | 0.086 | tmx2a | -0.055 |
| sall4 | 0.086 | rbm24a | -0.055 |
| ephb3 | 0.086 | CT573344.1 | -0.054 |
| sncgb | 0.085 | si:dkey-74k8.3 | -0.052 |
| raraa | 0.085 | txlnbb | -0.051 |
| gpm6aa | 0.084 | fabp3 | -0.051 |
| hoxc11a | 0.083 | si:ch1073-268j14.1 | -0.051 |
| pcdh8 | 0.083 | rpl38 | -0.051 |
| gng3 | 0.083 | tmem161a | -0.050 |
| tmeff1b | 0.083 | nexn | -0.050 |