| Positive correlation | Negative correlation | ||
| Gene | r | Gene | r |
| itm2cb | 0.099 | actn3a | -0.075 |
| her1 | 0.098 | smyd1a | -0.075 |
| thbs2a | 0.098 | neb | -0.071 |
| her12 | 0.097 | tmod4 | -0.071 |
| hoxd12a | 0.096 | tnnc2 | -0.070 |
| sall4 | 0.095 | actn3b | -0.070 |
| hoxb10a | 0.095 | XLOC-025819 | -0.067 |
| hoxd10a | 0.094 | pgam2 | -0.066 |
| hoxa13b | 0.093 | casq1b | -0.066 |
| rarga | 0.091 | gapdh | -0.066 |
| ephb3 | 0.091 | ak1 | -0.066 |
| hnrnpa0l | 0.090 | myom1a | -0.065 |
| gdf11 | 0.087 | si:ch73-367p23.2 | -0.065 |
| hsp90ab1 | 0.087 | tnnt3a | -0.065 |
| NAV1 (1 of many) | 0.085 | ckmb | -0.065 |
| greb1 | 0.084 | XLOC-005350 | -0.064 |
| zgc:162939 | 0.083 | pkmb | -0.064 |
| bmp2a | 0.083 | eno3 | -0.064 |
| her7 | 0.082 | klhl43 | -0.064 |
| h3f3d | 0.081 | nme2b.2 | -0.063 |
| h3f3a | 0.080 | dhrs7cb | -0.063 |
| her15.1 | 0.078 | si:ch211-266g18.10 | -0.063 |
| cyp26a1 | 0.078 | si:dkey-16p21.8 | -0.063 |
| si:ch1073-429i10.3.1 | 0.077 | XLOC-006515 | -0.063 |
| ewsr1b | 0.077 | prx | -0.063 |
| fzd10 | 0.077 | xirp2a | -0.062 |
| hes6 | 0.077 | cavin4b | -0.062 |
| esrrga | 0.076 | XLOC-001975 | -0.062 |
| BX005254.3 | 0.075 | actc1b | -0.062 |
| fgf3 | 0.075 | ckma | -0.062 |
| tspan7 | 0.075 | casq2 | -0.062 |
| hoxa11b | 0.074 | jph2 | -0.062 |
| myl7 | 0.074 | acta1a | -0.061 |
| hoxa10b | 0.074 | prr33 | -0.061 |
| eif3ea | 0.074 | si:ch211-255p10.3 | -0.060 |