| Positive correlation | Negative correlation | ||
| Gene | r | Gene | r |
| hoxb10a | 0.388 | zmp:0000000760 | -0.153 |
| gdf11 | 0.376 | cmn | -0.149 |
| BX001014.2 | 0.364 | zgc:113232 | -0.147 |
| cdx4 | 0.362 | si:ch73-23l24.1 | -0.144 |
| ldlrad2 | 0.357 | col2a1a | -0.143 |
| hoxd10a | 0.355 | col9a1b | -0.137 |
| her12 | 0.336 | col11a1a | -0.133 |
| fgf8a | 0.324 | krt8 | -0.132 |
| fgf20a | 0.324 | epyc | -0.130 |
| nradd | 0.322 | col11a2 | -0.128 |
| BX005254.3 | 0.322 | col9a2 | -0.124 |
| alpi.1 | 0.321 | ucmab | -0.124 |
| lrrc17 | 0.318 | cnmd | -0.123 |
| hoxb7a | 0.317 | col9a3 | -0.120 |
| hoxc3a | 0.311 | agtrap | -0.118 |
| si:dkey-40c11.2 | 0.310 | krt18a.1 | -0.117 |
| myclb | 0.310 | matn3a | -0.115 |
| si:ch211-129o18.4 | 0.308 | snorc | -0.109 |
| foxb1b | 0.307 | sparc | -0.108 |
| pcdh19 | 0.296 | susd5 | -0.108 |
| hoxd9a | 0.295 | si:dkey-31g6.6 | -0.106 |
| XLOC-042222 | 0.290 | krt5 | -0.105 |
| foxj1a | 0.278 | si:dkey-12l12.1 | -0.105 |
| sall4 | 0.276 | gas2b | -0.104 |
| hoxd12a | 0.274 | golim4b | -0.104 |
| pcp4a | 0.270 | ehd2b | -0.103 |
| hoxd11a | 0.267 | chad | -0.102 |
| cdaa | 0.266 | haus7 | -0.101 |
| nkx1.2la | 0.265 | wfdc2 | -0.101 |
| hoxa9a | 0.265 | mmp23bb | -0.100 |
| her15.1 | 0.259 | rgcc | -0.100 |
| wnt5b | 0.255 | si:ch211-243g18.2 | -0.099 |
| hoxc6b | 0.253 | FQ323156.1 | -0.099 |
| fzd10 | 0.251 | znf385a | -0.096 |
| fam49al | 0.251 | col2a1b | -0.096 |