| Positive correlation | Negative correlation | ||
| Gene | r | Gene | r |
| zic5 | 0.554 | tnrc6c1 | -0.088 |
| zic1 | 0.424 | rbfox1 | -0.086 |
| zic4 | 0.364 | rtn1a | -0.086 |
| zic3 | 0.306 | gpm6ab | -0.086 |
| zic6 | 0.250 | zfhx3 | -0.085 |
| zic2b | 0.241 | robo2 | -0.083 |
| si:ch211-69b22.5 | 0.225 | ebf3a | -0.082 |
| msx1b | 0.216 | gpm6aa | -0.081 |
| clybl | 0.203 | mab21l2 | -0.081 |
| fzd10 | 0.195 | syt2a | -0.077 |
| cdon | 0.187 | si:ch73-386h18.1 | -0.076 |
| nebl | 0.182 | cbfa2t3 | -0.076 |
| wls | 0.179 | pbx3b | -0.075 |
| gas1a | 0.171 | meis2a | -0.074 |
| fabp11a | 0.169 | nova1 | -0.074 |
| BX469902.1 | 0.162 | cplx2l | -0.074 |
| tpbga | 0.158 | elavl3 | -0.073 |
| gdf10a | 0.157 | tmsb2 | -0.072 |
| mdkb | 0.152 | id4 | -0.072 |
| rspo3 | 0.149 | ebf1a | -0.071 |
| olig3 | 0.148 | pik3r3b | -0.070 |
| bcam | 0.147 | snap25a | -0.070 |
| axin2 | 0.146 | slc6a1b | -0.069 |
| neurod2 | 0.145 | cadm4 | -0.069 |
| pdgfaa | 0.144 | nsg2 | -0.068 |
| mdka | 0.139 | thsd7aa | -0.068 |
| tnfrsf19 | 0.138 | cadm3 | -0.068 |
| msx3 | 0.137 | ckbb | -0.067 |
| boc | 0.137 | hapln1a | -0.067 |
| msx1a | 0.136 | tmem59l | -0.066 |
| cldn5a | 0.135 | gabrb4 | -0.066 |
| id1 | 0.133 | stmn1b | -0.066 |
| zfp36l1a | 0.133 | slc32a1 | -0.066 |
| cyp26c1 | 0.130 | stx1b | -0.066 |
| draxin | 0.126 | tuba1c | -0.066 |