| Positive correlation | Negative correlation | ||
| Gene | r | Gene | r |
| lhx1a | 0.531 | sox3 | -0.349 |
| mespab | 0.516 | id1 | -0.279 |
| msgn1 | 0.503 | cxcr4b | -0.264 |
| dkk1b | 0.488 | sox19a | -0.230 |
| FP102169.1 | 0.486 | cited4b | -0.227 |
| gata5 | 0.483 | inka1a | -0.178 |
| efnb2b | 0.453 | asb11 | -0.178 |
| osr1 | 0.450 | zic2b | -0.166 |
| gata6 | 0.443 | foxd5 | -0.144 |
| mespaa | 0.422 | sb:cb81 | -0.144 |
| pitx2 | 0.421 | si:ch1073-80i24.3 | -0.137 |
| foxa | 0.419 | foxh1 | -0.126 |
| aplnrb | 0.407 | cxcr4a | -0.124 |
| efnb2a | 0.401 | shisa2a | -0.124 |
| sp5a | 0.392 | glulb | -0.123 |
| tbxta | 0.392 | zgc:64022 | -0.106 |
| BX927327.1 | 0.390 | blf | -0.105 |
| ism1 | 0.386 | zgc:100951 | -0.099 |
| ndr2 | 0.381 | pfkfb4b | -0.098 |
| kirrel3l | 0.375 | aldob | -0.097 |
| dusp4 | 0.375 | mex3b | -0.089 |
| wnt11f2 | 0.369 | snai2 | -0.088 |
| lft1 | 0.365 | klf2b | -0.087 |
| fscn1a | 0.365 | gata2a | -0.086 |
| fgf8a | 0.363 | rgcc | -0.085 |
| cyp27c1 | 0.356 | cdca7a | -0.084 |
| efna1a | 0.355 | zgc:113424 | -0.084 |
| lft2 | 0.349 | si:dkey-11o15.10 | -0.082 |
| trib3 | 0.346 | kazald2 | -0.081 |
| aldh1a2 | 0.345 | si:ch211-170d8.2 | -0.081 |
| sebox | 0.339 | fzd4 | -0.081 |
| plekhn1 | 0.337 | gadd45ga | -0.081 |
| ndr1 | 0.332 | hirip3 | -0.080 |
| flrt3 | 0.325 | hmgb2a | -0.080 |
| fgf3 | 0.320 | sox2 | -0.079 |