shha (fin): Daniocell

Daniocell

shha (fin)

sonic hedgehog signaling molecule a ZFIN

Gene expression UMAP

Download UMAP

Other cell groups

all cells	blastomeres	PGCs	endoderm	axial mesoderm
muscle	mural cells / non-skeletal muscle	mesenchyme	hematopoietic / vasculature	pronephros
neural	spinal cord / glia	eye	taste / olfactory	otic / lateral line
epidermis	periderm	fin	ionocytes / mucous	pigment cells

Expression by stage/cluster

Correlated gene expression

Positive correlation		Negative correlation
Gene	r	Gene	r
shhb	0.530	col1a1a	-0.061
hand2	0.249	sparc	-0.050
ptch2	0.233	rbp4	-0.049
sostdc1b	0.213	tob1a	-0.048
tmprss3b	0.206	spaca4l	-0.047
foxa2	0.192	krt5	-0.046
spon1b	0.190	si:rp71-77l1.1	-0.046
BX248515.2	0.183	pleca	-0.046
crispld1b	0.179	pfn1	-0.045
si:dkey-7k24.5	0.176	tmsb4x	-0.045
LOC108181518	0.170	si:dkey-16p21.8	-0.045
XLOC-005894	0.170	ptgdsb.1	-0.045
tbx5a	0.166	DSG2	-0.044
si:dkey-43p13.5	0.165	capns1a	-0.044
foxi2	0.164	si:dkey-248g15.3	-0.043
zgc:171929.1	0.163	cyt1l	-0.043
bmp5	0.160	zgc:175088	-0.043
igsf11	0.158	itm2bb	-0.043
hoxd12a	0.156	krt4	-0.042
LOC108180164	0.155	postnb	-0.042
LOC101883820	0.155	cyt1	-0.042
LOC110437924.1	0.152	capn2a	-0.041
si:ch211-193e13.5	0.152	si:dkey-33c14.3	-0.041
XLOC-005727	0.151	cd99	-0.041
asip1	0.150	zgc:153284	-0.041
fgf20b	0.148	tmsb1	-0.041
XLOC-015209	0.146	col12a1b	-0.040
olfm1a	0.146	itgb1b.2	-0.040
LOC103911531.1	0.144	cfl1l	-0.040
nkx3.3	0.144	adamtsl7	-0.040
cxcl12a	0.142	im:7150988	-0.040
XLOC-009289	0.142	cast	-0.039
BX119902.3	0.142	plecb	-0.039
BX855623.1	0.142	anxa1a	-0.039
XLOC-021259	0.141	col17a1a	-0.039