| Positive correlation | Negative correlation | ||
| Gene | r | Gene | r |
| CR751602.2 | 0.249 | hoxb9a | -0.181 |
| fabp7a | 0.225 | elavl3 | -0.179 |
| nfia | 0.224 | hoxc3a | -0.165 |
| fgfr2 | 0.222 | hoxb8a | -0.160 |
| cd82a | 0.221 | hoxb3a | -0.159 |
| ptn | 0.216 | myt1b | -0.152 |
| slc1a3b | 0.214 | ptmaa | -0.151 |
| CR848047.1 | 0.207 | hoxd3a | -0.143 |
| CU467822.1 | 0.207 | gng3 | -0.135 |
| shha | 0.198 | si:ch73-386h18.1 | -0.133 |
| fgfr3 | 0.197 | hoxc9a | -0.133 |
| her6 | 0.192 | stxbp1a | -0.132 |
| ppap2d | 0.188 | hoxb1b | -0.131 |
| wls | 0.187 | stx1b | -0.128 |
| ntn1b | 0.185 | hoxa9a | -0.126 |
| cnn2 | 0.185 | sncb | -0.125 |
| sox2 | 0.184 | elavl4 | -0.124 |
| metrnla | 0.183 | zc4h2 | -0.123 |
| si:ch211-66e2.5 | 0.182 | snap25a | -0.122 |
| CU634008.1 | 0.181 | hoxc8a | -0.121 |
| gpm6bb | 0.179 | ptmab | -0.121 |
| si:dkey-7j14.6 | 0.175 | hoxd9a | -0.119 |
| slit2 | 0.175 | hoxa3a | -0.119 |
| id1 | 0.174 | jagn1a | -0.118 |
| zgc:165461 | 0.174 | vamp2 | -0.118 |
| slc1a2b | 0.168 | myt1a | -0.116 |
| marcksl1a | 0.168 | tmeff1b | -0.115 |
| si:ch1073-303k11.2 | 0.167 | LOC100537384 | -0.115 |
| klf6a | 0.166 | cplx2 | -0.113 |
| msi1 | 0.166 | onecut1 | -0.113 |
| notch3 | 0.165 | onecut2 | -0.112 |
| tnc | 0.165 | rtn1b | -0.111 |
| sox5 | 0.161 | syt2a | -0.111 |
| zgc:101100 | 0.161 | pik3r3b | -0.111 |
| cldn5a | 0.161 | hoxb7a | -0.111 |