notochord granular surface
ZFIN 
Gene expression UMAP
Other cell groups
all cells |
blastomeres |
PGCs |
endoderm |
axial mesoderm |
muscle  |
mural cells / non-skeletal muscle  |
mesenchyme  |
hematopoietic / vasculature  |
pronephros  |
neural |
spinal cord / glia |
eye |
taste / olfactory |
otic / lateral line |
epidermis |
periderm |
fin |
ionocytes / mucous |
pigment cells |
Expression by stage/cluster
Correlated gene expression
| Positive correlation | Negative correlation | ||
| Gene | r | Gene | r |
| si:dkeyp-118a3.2 | 0.109 | apoeb | -0.009 |
| chadla | 0.104 | si:dkey-16p21.8 | -0.009 |
| paqr4b | 0.103 | atp6v0cb | -0.008 |
| susd5 | 0.103 | epcam | -0.008 |
| cmn | 0.102 | f11r.1 | -0.008 |
| si:ch211-106h4.6 | 0.100 | oclna | -0.008 |
| zmp:0000000760 | 0.099 | olfm1b | -0.008 |
| zgc:113232 | 0.097 | prr13 | -0.008 |
| col9a1b | 0.089 | snap25b | -0.008 |
| LO018422.1 | 0.088 | sncb | -0.008 |
| si:ch73-23l24.1 | 0.088 | ube2e1 | -0.008 |
| col8a1a | 0.084 | anxa1a | -0.007 |
| slc38a8b | 0.084 | apoc1 | -0.007 |
| ihhb | 0.080 | atp1a3a | -0.007 |
| sncga | 0.079 | cbx3a | -0.007 |
| matn3b | 0.077 | cfl1l | -0.007 |
| wu:fc23c09 | 0.074 | chd4a | -0.007 |
| si:ch211-13f8.2 | 0.073 | dlx3b | -0.007 |
| si:ch73-379f7.4 | 0.066 | gbp | -0.007 |
| cobll1a | 0.065 | gng3 | -0.007 |
| agtrap | 0.064 | pycard | -0.007 |
| loxl5b | 0.064 | selenow2b | -0.007 |
| si:dkey-234i14.3 | 0.064 | snap25a | -0.007 |
| gas2b | 0.063 | sncgb | -0.007 |
| rab38c | 0.063 | stmn1b | -0.007 |
| shha | 0.063 | syngr3a | -0.007 |
| si:ch211-1a19.3 | 0.062 | tmem238a | -0.007 |
| igsf10 | 0.061 | tmsb1 | -0.007 |
| si:dkey-174i8.1 | 0.060 | vamp2 | -0.007 |
| snorc | 0.060 | zgc:153284 | -0.007 |
| tbxta | 0.060 | nrxn2a | -0.007 |
| vimr2 | 0.060 | abcb5 | -0.006 |
| chad | 0.058 | adgrl3.1 | -0.006 |
| ehd2b | 0.058 | akirin2 | -0.006 |
| ca8 | 0.057 | aldob | -0.006 |