notochord granular surface
ZFIN 
Gene expression UMAP
Other cell groups
all cells |
blastomeres |
PGCs |
endoderm |
axial mesoderm |
muscle  |
mural cells / non-skeletal muscle  |
mesenchyme  |
hematopoietic / vasculature  |
pronephros  |
neural |
spinal cord / glia |
eye |
taste / olfactory |
otic / lateral line |
epidermis |
periderm |
fin |
ionocytes / mucous |
pigment cells |
Expression by stage/cluster
Correlated gene expression
| Positive correlation | Negative correlation | ||
| Gene | r | Gene | r |
| si:dkey-202g17.3 | 0.368 | atp5f1e | -0.015 |
| si:dkeyp-118a3.2 | 0.361 | rpl14 | -0.014 |
| vimr1 | 0.346 | eif2s2 | -0.012 |
| slc38a8b | 0.331 | blvrb | -0.012 |
| LOC101885837 | 0.330 | ndufs5 | -0.012 |
| si:dkey-265e15.5 | 0.269 | slc11a2 | -0.012 |
| LOC108179220 | 0.255 | npm1a | -0.011 |
| paqr4b | 0.214 | zgc:163057 | -0.011 |
| loxl5b | 0.193 | pbdc1 | -0.011 |
| wu:fc23c09 | 0.190 | nmt1b | -0.011 |
| si:ch211-147d7.5 | 0.172 | slc4a1a | -0.011 |
| mal2 | 0.165 | vdac2 | -0.011 |
| cmn | 0.149 | rpa2 | -0.011 |
| si:ch211-149b19.4 | 0.145 | gstm.1 | -0.010 |
| CR384075.1 | 0.142 | prps1a | -0.010 |
| si:ch211-28e16.5 | 0.138 | hemgn | -0.010 |
| slc34a1a | 0.126 | nop56 | -0.010 |
| zgc:172253 | 0.122 | anp32b | -0.010 |
| megf11 | 0.117 | mrpl36 | -0.010 |
| zgc:113232 | 0.112 | fam53b | -0.010 |
| mkxa | 0.109 | slc16a10 | -0.010 |
| sncga | 0.105 | dkc1 | -0.010 |
| cav3 | 0.103 | coa6 | -0.010 |
| insl5a | 0.101 | suds3 | -0.010 |
| dbh | 0.101 | zgc:56095 | -0.010 |
| CR788316.1 | 0.100 | tmem256 | -0.010 |
| LOC100332834 | 0.094 | eif3c | -0.010 |
| col4a4 | 0.093 | ndufb8 | -0.010 |
| col8a1a | 0.093 | cox8a | -0.010 |
| zmp:0000000760 | 0.092 | tfr1a | -0.010 |
| trhra | 0.091 | znf593 | -0.009 |
| si:dkey-27n6.9 | 0.089 | ptges3b | -0.009 |
| mgp | 0.088 | epb41b | -0.009 |
| kctd12.1 | 0.083 | pabpc1a | -0.009 |
| ccdc135 | 0.081 | bccip | -0.009 |