| Positive correlation | Negative correlation | ||
| Gene | r | Gene | r |
| hoxd12a | 0.349 | fibina | -0.055 |
| hoxa13b | 0.259 | cdh11 | -0.045 |
| tbx5a | 0.223 | foxp4 | -0.044 |
| hoxd11a | 0.202 | dlx5a | -0.042 |
| hoxa11b | 0.195 | cd248b | -0.039 |
| hoxa10b | 0.184 | barx1 | -0.037 |
| hoxd9a | 0.179 | dlx2a | -0.037 |
| clic2 | 0.145 | six2a | -0.037 |
| shhb | 0.140 | cldn11a | -0.036 |
| col8a2 | 0.135 | eya1 | -0.036 |
| emilin3a | 0.132 | hpgd | -0.034 |
| rxfp2a | 0.131 | dlx4a | -0.032 |
| hoxa9b | 0.125 | tuba8l3 | -0.032 |
| shox2 | 0.121 | dlx1a | -0.031 |
| ppp1r1c | 0.117 | dlx3b | -0.031 |
| samd10a | 0.117 | sfrp2 | -0.030 |
| hoxd10a | 0.114 | mab21l2 | -0.030 |
| her7 | 0.113 | vasna | -0.030 |
| hoxc11b | 0.111 | twist2 | -0.030 |
| tbx15 | 0.101 | foxf2a | -0.030 |
| si:dkey-19b23.8 | 0.101 | igf2b | -0.029 |
| hoxc12b | 0.096 | lhx6 | -0.029 |
| fam49a | 0.096 | hoxa2b | -0.029 |
| hand2 | 0.095 | olfml3b | -0.029 |
| crabp1b | 0.094 | c1qbp | -0.028 |
| cyp1b1 | 0.092 | pbx3b | -0.028 |
| clu | 0.092 | ackr3b | -0.028 |
| tbx3a | 0.088 | ociad2 | -0.028 |
| hoxa13a | 0.088 | dlx4b | -0.028 |
| chl1b | 0.087 | pbx1b | -0.028 |
| myoc | 0.087 | prss35 | -0.027 |
| loxl4 | 0.086 | foxd1 | -0.027 |
| col8a1a | 0.086 | adgrl2a | -0.027 |
| eps8l2 | 0.086 | alx1 | -0.027 |
| lhx2b | 0.085 | socs3a | -0.027 |