| Positive correlation | Negative correlation | ||
| Gene | r | Gene | r |
| hoxc6a | 0.156 | col9a1a | -0.039 |
| hoxb5a | 0.151 | col2a1a | -0.037 |
| hoxb6a | 0.141 | col9a2 | -0.036 |
| hoxb5b | 0.136 | col9a3 | -0.034 |
| hoxc3a | 0.110 | col11a1a | -0.034 |
| hoxb8a | 0.103 | VIT | -0.030 |
| BX927243.2 | 0.101 | cnmd | -0.030 |
| hoxc1a | 0.096 | foxc1b | -0.030 |
| hoxc4a | 0.094 | fgfbp2b | -0.030 |
| hoxb6b | 0.082 | col11a2 | -0.029 |
| LOC103911612 | 0.069 | fxyd1 | -0.028 |
| tmem98 | 0.069 | dlx5a | -0.028 |
| meis2b | 0.068 | fibina | -0.027 |
| hoxb3a | 0.067 | sox9a | -0.027 |
| XLOC-002671 | 0.064 | col2a1b | -0.027 |
| si:ch211-243a20.3 | 0.063 | cthrc1a | -0.026 |
| meis3 | 0.062 | otos | -0.025 |
| zte38 | 0.062 | ucmab | -0.025 |
| meis1b | 0.062 | phlda3 | -0.024 |
| LOC101882397 | 0.061 | serpinh1b | -0.024 |
| spink2.2 | 0.059 | epyc | -0.024 |
| LOC101885174 | 0.059 | wwp2 | -0.023 |
| meis1a | 0.059 | si:dkey-6n6.1 | -0.023 |
| LOC101883054 | 0.059 | dlx6a | -0.023 |
| csf2rb | 0.058 | trabd2a | -0.022 |
| aldh1a2 | 0.058 | hapln1b | -0.022 |
| pbx1a | 0.058 | dlx4a | -0.022 |
| hoxb1b | 0.058 | rarga | -0.022 |
| rdh10a | 0.056 | si:dkey-16p21.8 | -0.022 |
| jun | 0.056 | dlx3b | -0.022 |
| hoxa5a | 0.055 | slc12a2 | -0.021 |
| hoxa3a | 0.054 | AL929222.2 | -0.021 |
| wnt11r | 0.052 | zgc:153675 | -0.021 |
| crabp1b | 0.052 | matn4 | -0.021 |
| znf994 | 0.051 | thbs1b | -0.021 |