| Positive correlation | Negative correlation | ||
| Gene | r | Gene | r |
| hoxb13a | 0.593 | hdlbpa | -0.058 |
| hoxc13a | 0.529 | col9a3 | -0.055 |
| hoxc12b | 0.492 | zgc:113232 | -0.054 |
| hoxa13a | 0.472 | col2a1a | -0.054 |
| si:dkeyp-110a12.4 | 0.453 | zmp:0000000760 | -0.054 |
| hoxd12a | 0.450 | col9a1b | -0.053 |
| hoxc13b | 0.425 | FQ323156.1 | -0.053 |
| hoxd13a | 0.397 | krt8 | -0.052 |
| eve1 | 0.377 | gadd45ba | -0.050 |
| lrrc17 | 0.368 | si:ch73-23l24.1 | -0.049 |
| hoxb10a | 0.355 | akap12b | -0.049 |
| hoxa10b | 0.344 | insb | -0.049 |
| c1qtnf5 | 0.317 | fkbp11 | -0.049 |
| fgf10a | 0.315 | col11a1a | -0.048 |
| her12 | 0.292 | cmn | -0.048 |
| LOC110439428 | 0.290 | agtrap | -0.048 |
| gdf11 | 0.274 | col11a2 | -0.048 |
| prrx1b | 0.269 | epyc | -0.047 |
| hoxa11a | 0.265 | NC-002333.4 | -0.047 |
| hoxc11a | 0.264 | col2a1b | -0.047 |
| LOC100538221 | 0.260 | ell2 | -0.047 |
| sall4 | 0.259 | CR381618.1 | -0.047 |
| hoxd10a | 0.258 | rrbp1a | -0.047 |
| fbln1 | 0.252 | krt18a.1 | -0.046 |
| her15.1 | 0.251 | tdgf1 | -0.045 |
| XLOC-003690 | 0.249 | sec61b | -0.045 |
| zgc:162939 | 0.247 | foxa3 | -0.045 |
| her2 | 0.240 | atp1b3b | -0.044 |
| XLOC-042222 | 0.238 | cnmd | -0.044 |
| tagln3b | 0.234 | metap2b | -0.044 |
| LOC101887111 | 0.230 | p4ha2 | -0.044 |
| cfap45 | 0.229 | aldob | -0.043 |
| pcp4a | 0.227 | si:ch211-152c2.3 | -0.043 |
| fgf3 | 0.226 | s100a1 | -0.043 |
| hoxc10a | 0.220 | rbmx2 | -0.043 |