| Positive correlation | Negative correlation | ||
| Gene | r | Gene | r |
| fgf10b | 0.341 | blvrb | -0.079 |
| hoxb10a | 0.341 | hbbe1.3 | -0.079 |
| emilin2b | 0.315 | cahz | -0.078 |
| mnx1 | 0.307 | pvalb1 | -0.077 |
| hoxb7a | 0.289 | tspo | -0.075 |
| wu:fb97g03 | 0.277 | hbae1.1 | -0.074 |
| npas4l | 0.273 | pvalb2 | -0.073 |
| BX005254.3 | 0.269 | hemgn | -0.073 |
| wnt2bb | 0.260 | hbae3 | -0.072 |
| lsp1 | 0.258 | hbbe2 | -0.071 |
| fbn2a.1 | 0.258 | slc4a1a | -0.070 |
| hoxc3a | 0.257 | hbbe1.1 | -0.070 |
| hoxa11b | 0.250 | hbae1.3 | -0.069 |
| BX001014.2 | 0.246 | gpx1a | -0.066 |
| CABZ01074130.1 | 0.244 | hbbe1.2 | -0.062 |
| mfap2 | 0.241 | prdx2 | -0.062 |
| dact2 | 0.230 | alas2 | -0.061 |
| morc3b | 0.229 | nt5c2l1 | -0.061 |
| lin28a | 0.228 | plac8l1 | -0.059 |
| vox | 0.225 | actc1b | -0.058 |
| ripply2 | 0.222 | nmt1b | -0.056 |
| sall4 | 0.209 | tmod4 | -0.055 |
| hoxa10b | 0.209 | epb41b | -0.054 |
| hoxa11a | 0.208 | zgc:163057 | -0.052 |
| hoxb9a | 0.208 | creg1 | -0.052 |
| LOC100538221 | 0.208 | mylpfa | -0.051 |
| and2 | 0.206 | si:ch211-207c6.2 | -0.051 |
| hoxd10a | 0.205 | si:ch211-250g4.3 | -0.050 |
| vcana | 0.203 | tmem14ca | -0.049 |
| c1qtnf5 | 0.202 | ucp3 | -0.048 |
| tmem119b | 0.201 | klf1 | -0.047 |
| dusp4 | 0.198 | coro1a | -0.046 |
| rcor2 | 0.197 | crip1 | -0.046 |
| lmo2 | 0.197 | bloc1s6 | -0.045 |
| pah | 0.191 | mylz3 | -0.045 |