Gene expression UMAP
Other cell groups
all cells |
blastomeres |
PGCs |
endoderm |
axial mesoderm |
muscle  |
mural cells / non-skeletal muscle  |
mesenchyme  |
hematopoietic / vasculature  |
pronephros  |
neural |
spinal cord / glia |
eye |
taste / olfactory |
otic / lateral line |
epidermis |
periderm |
fin |
ionocytes / mucous |
pigment cells |
Expression by stage/cluster
Correlated gene expression
| Positive correlation | Negative correlation | ||
| Gene | r | Gene | r |
| sox32 | 0.179 | ptmaa | -0.053 |
| gata5 | 0.162 | rpl37 | -0.052 |
| sox17 | 0.160 | CR383676.1 | -0.051 |
| tbx16 | 0.153 | tuba1c | -0.051 |
| snai1a | 0.153 | tmsb4x | -0.051 |
| wu:fb97g03 | 0.128 | rps10 | -0.050 |
| mespab | 0.127 | zgc:114188 | -0.047 |
| insb | 0.126 | fabp3 | -0.045 |
| tbxta | 0.122 | h3f3a | -0.045 |
| mespaa | 0.118 | nova2 | -0.045 |
| drl | 0.113 | ppiab | -0.044 |
| FP102169.1 | 0.111 | marcksl1a | -0.043 |
| LOC100008030 | 0.108 | elavl3 | -0.041 |
| XLOC-035742 | 0.105 | gpm6aa | -0.040 |
| BX469925.3 | 0.102 | rtn1a | -0.040 |
| cxcr4a | 0.101 | nme2b.1 | -0.039 |
| hspb1 | 0.092 | hnrnpa0l | -0.038 |
| si:dkeyp-2e4.3 | 0.092 | stmn1b | -0.038 |
| XLOC-015209 | 0.091 | zgc:158463 | -0.037 |
| ddx4 | 0.090 | mt-nd1 | -0.036 |
| gata6 | 0.090 | tmsb | -0.035 |
| cyp2aa8 | 0.090 | celf2 | -0.035 |
| XLOC-014747 | 0.089 | rps17 | -0.034 |
| vent | 0.086 | mt-atp6 | -0.033 |
| stm | 0.086 | si:ch1073-429i10.3.1 | -0.033 |
| si:dkey-261j4.5 | 0.084 | ckbb | -0.031 |
| vox | 0.084 | rnasekb | -0.031 |
| opn1mw3 | 0.081 | mdkb | -0.031 |
| pltp | 0.080 | fam168a | -0.031 |
| apoc1 | 0.079 | calm1a | -0.031 |
| sp5l | 0.078 | tuba1a | -0.031 |
| XLOC-041707 | 0.077 | atp5f1b | -0.030 |
| akap12b | 0.076 | h3f3c | -0.030 |
| apoeb | 0.076 | pvalb1 | -0.030 |
| zgc:56699 | 0.075 | actc1b | -0.030 |