| Positive correlation | Negative correlation | ||
| Gene | r | Gene | r |
| rspo2 | 0.213 | ptmaa | -0.067 |
| fzd10 | 0.143 | elavl3 | -0.063 |
| wls | 0.118 | sp8b | -0.056 |
| mdkb | 0.117 | tmsb | -0.053 |
| mdka | 0.117 | tubb2b | -0.053 |
| lmx1bb | 0.115 | gng2 | -0.052 |
| zic1 | 0.113 | si:ch211-222l21.1 | -0.052 |
| gdf10a | 0.107 | ptmab | -0.052 |
| msx3 | 0.102 | gng3 | -0.052 |
| bmp6 | 0.101 | elavl4 | -0.051 |
| boc | 0.099 | si:dkey-276j7.1 | -0.050 |
| zic5 | 0.098 | h3f3d | -0.050 |
| zic3 | 0.097 | sncb | -0.050 |
| si:ch211-66e2.5 | 0.096 | stxbp1a | -0.050 |
| wnt10a | 0.096 | stx1b | -0.050 |
| vasna | 0.094 | tubb5 | -0.050 |
| ptn | 0.093 | tuba1c | -0.049 |
| sema3gb | 0.093 | myt1b | -0.049 |
| zic2b | 0.092 | snap25a | -0.049 |
| si:dkey-34d22.1 | 0.092 | gap43 | -0.046 |
| XLOC-023308 | 0.091 | nkx6.1 | -0.046 |
| zic2a | 0.090 | stmn1b | -0.046 |
| apof | 0.088 | rtn1b | -0.045 |
| si:ch211-69b22.5 | 0.088 | hnrnpaba | -0.045 |
| bmper | 0.087 | stmn2a | -0.045 |
| wnt8b | 0.087 | ywhag2 | -0.044 |
| adamtsl5 | 0.087 | calm1a | -0.044 |
| slc4a4a | 0.086 | cirbpb | -0.044 |
| sept8b | 0.084 | myt1a | -0.043 |
| qki2 | 0.083 | map1aa | -0.043 |
| msx1b | 0.083 | cplx2 | -0.043 |
| cx43 | 0.083 | cplx2l | -0.042 |
| zic4 | 0.083 | id4 | -0.042 |
| gas1a | 0.083 | zc4h2 | -0.042 |
| bmp4 | 0.082 | sp8a | -0.042 |