| Positive correlation | Negative correlation | ||
| Gene | r | Gene | r |
| shhb | 0.162 | cbx3a | -0.022 |
| ntn1b | 0.149 | hnrnpaba | -0.022 |
| spon1b | 0.101 | setb | -0.022 |
| ntn1a | 0.094 | snrpb | -0.022 |
| ldlrad2 | 0.091 | hnrnpabb | -0.021 |
| foxa2 | 0.090 | nop58 | -0.021 |
| nkx2.2b | 0.086 | fthl27 | -0.020 |
| sulf1 | 0.084 | syncrip | -0.020 |
| gpc5b | 0.082 | rpa3 | -0.020 |
| wnt11r | 0.076 | anp32b | -0.020 |
| ptn | 0.076 | snu13b | -0.019 |
| cxcl12b | 0.076 | fbl | -0.019 |
| foxa | 0.075 | si:ch211-222l21.1 | -0.019 |
| wif1 | 0.075 | rsl1d1 | -0.019 |
| nkx2.9 | 0.074 | nasp | -0.019 |
| en2a | 0.074 | hsp90ab1 | -0.019 |
| bicc2 | 0.071 | h2afvb | -0.019 |
| en1b | 0.070 | ssrp1a | -0.018 |
| slf1 | 0.069 | bud31 | -0.018 |
| cnpy1 | 0.066 | hmga1a | -0.018 |
| LOC101886779 | 0.066 | eif3f | -0.018 |
| fgf8b | 0.065 | gas1b | -0.018 |
| FO834800.2 | 0.063 | khdrbs1a | -0.018 |
| si:dkey-208c12.2 | 0.059 | rrp1 | -0.018 |
| cass4 | 0.058 | cirbpa | -0.018 |
| foxa1 | 0.058 | hmgn7 | -0.018 |
| foxj1a | 0.057 | pfdn4 | -0.018 |
| XLOC-029389 | 0.057 | pax3a | -0.018 |
| pax5 | 0.056 | si:ch211-217k17.7 | -0.018 |
| en2b | 0.055 | polr2eb | -0.017 |
| nkx6.2 | 0.052 | ncl | -0.017 |
| afap1l2 | 0.051 | tubb2b | -0.017 |
| daw1 | 0.051 | nhp2 | -0.017 |
| cdo1 | 0.050 | pcna | -0.017 |
| btr24 | 0.049 | ptmab | -0.017 |