| Positive correlation | Negative correlation | ||
| Gene | r | Gene | r |
| meis1b | 0.128 | CU634008.1 | -0.040 |
| hoxc1a | 0.082 | XLOC-003690 | -0.037 |
| hoxb1b | 0.076 | si:ch73-30b17.2 | -0.036 |
| cav1 | 0.075 | XLOC-003692 | -0.034 |
| islr2 | 0.075 | zwi | -0.034 |
| hoxb8a | 0.072 | snu13b | -0.034 |
| hoxb3a | 0.072 | si:ch211-156b7.4 | -0.034 |
| snap25a | 0.072 | CR751602.2 | -0.034 |
| nefmb | 0.072 | efnb1 | -0.034 |
| slc4a10a | 0.072 | podxl | -0.033 |
| onecut1 | 0.071 | her4.1 | -0.033 |
| clstn2 | 0.070 | otx2a | -0.032 |
| dsg2.1 | 0.069 | her6 | -0.031 |
| meis3 | 0.068 | CU467822.1 | -0.031 |
| znf503 | 0.067 | her4.2 | -0.030 |
| pbx1a | 0.066 | zeb2a | -0.030 |
| hoxa3a | 0.066 | rrp1 | -0.030 |
| pcsk1nl | 0.066 | rpl39 | -0.030 |
| onecut3a | 0.066 | eef1b2 | -0.030 |
| lrrc39 | 0.066 | celf2 | -0.030 |
| plecb | 0.066 | COX7A2 (1 of many) | -0.029 |
| hoxb6b | 0.065 | CR848047.1 | -0.029 |
| hoxc3a | 0.064 | bzw1b | -0.029 |
| col4a5 | 0.064 | si:ch73-215f7.1 | -0.029 |
| slc10a1 | 0.064 | rpl26 | -0.029 |
| XLOC-016165 | 0.063 | rpl38 | -0.028 |
| hoxb5b | 0.063 | otx1 | -0.028 |
| sstr2a | 0.062 | rpl37 | -0.028 |
| kif5aa | 0.062 | si:dkey-151g10.6 | -0.028 |
| pleca | 0.062 | tspan7 | -0.027 |
| cplx2l | 0.061 | syngr2b | -0.027 |
| dhrs3b | 0.061 | rpl23 | -0.027 |
| vwa7 | 0.061 | foxd3 | -0.027 |
| rbfox1 | 0.061 | rps7 | -0.027 |
| wu:fi04e12 | 0.060 | foxg1a | -0.027 |