| Positive correlation | Negative correlation | ||
| Gene | r | Gene | r |
| ism1 | 0.362 | id1 | -0.185 |
| kirrel3l | 0.341 | sox3 | -0.145 |
| efnb2b | 0.339 | cxcr4b | -0.138 |
| gata6 | 0.301 | cited4b | -0.123 |
| msgn1 | 0.296 | asb11 | -0.117 |
| efnb2a | 0.288 | sox19a | -0.105 |
| gata5 | 0.280 | zic2b | -0.103 |
| foxa | 0.274 | sb:cb81 | -0.094 |
| pitx2 | 0.274 | si:ch1073-80i24.3 | -0.089 |
| lhx1a | 0.273 | foxd5 | -0.087 |
| elovl6 | 0.273 | inka1a | -0.081 |
| plekhn1 | 0.266 | mex3b | -0.076 |
| six4a | 0.265 | glulb | -0.075 |
| dkk1b | 0.254 | mych | -0.071 |
| rnd1b | 0.253 | aldob | -0.070 |
| frmd4ba | 0.252 | apela | -0.066 |
| sp5a | 0.248 | foxh1 | -0.065 |
| dusp4 | 0.242 | cdca7a | -0.059 |
| sox32 | 0.231 | nasp | -0.059 |
| aplnra | 0.230 | blf | -0.058 |
| lmo1 | 0.227 | stmn1a | -0.058 |
| efna1a | 0.225 | polr3gla | -0.057 |
| mespab | 0.218 | zgc:77118 | -0.056 |
| mespaa | 0.218 | ccna1 | -0.055 |
| flrt3 | 0.215 | pfkfb4b | -0.054 |
| insb | 0.213 | sub1b | -0.051 |
| olig2 | 0.212 | snu13b | -0.051 |
| im:7138239 | 0.206 | mkrn4 | -0.050 |
| FP102169.1 | 0.204 | nanog | -0.050 |
| zic2a | 0.201 | dnajb1b | -0.050 |
| lft2 | 0.196 | pprc1 | -0.050 |
| foxc1a | 0.190 | bud31 | -0.049 |
| CR847953.1 | 0.183 | LOC101885477 | -0.048 |
| ripply2 | 0.182 | stk35l | -0.048 |
| trib3 | 0.177 | sox2 | -0.048 |