| Positive correlation | Negative correlation | ||
| Gene | r | Gene | r |
| cdx4 | 0.296 | krtt1c19e | -0.159 |
| emx2 | 0.259 | col1a1a | -0.157 |
| lsp1 | 0.259 | krt91 | -0.155 |
| b3gnt7 | 0.258 | col1a2 | -0.145 |
| hoxc8a | 0.250 | krt5 | -0.143 |
| hoxc3a | 0.249 | col1a1b | -0.143 |
| asb11 | 0.244 | rplp2 | -0.137 |
| BX005254.3 | 0.232 | rbp4 | -0.136 |
| prickle1a | 0.231 | si:dkey-33c14.3 | -0.133 |
| apoc1 | 0.231 | capns1a | -0.128 |
| tpm4a | 0.226 | zgc:136930 | -0.127 |
| hoxc6b | 0.221 | postnb | -0.124 |
| hoxb9a | 0.215 | eef1da | -0.123 |
| insl5a | 0.215 | aep1 | -0.123 |
| vcana | 0.211 | lgals1l1 | -0.122 |
| itih5 | 0.210 | ahcy | -0.120 |
| emilin1b | 0.207 | si:dkey-183i3.5 | -0.119 |
| znfl2a | 0.201 | anxa1a | -0.118 |
| hoxb7a | 0.200 | wu:fa03e10 | -0.118 |
| lin28a | 0.192 | col14a1b | -0.117 |
| hoxb3a | 0.192 | aqp3a | -0.117 |
| zgc:154093 | 0.191 | gapdhs | -0.115 |
| mllt3 | 0.191 | sparc | -0.112 |
| akap12b | 0.187 | col2a1b | -0.112 |
| BX469925.3 | 0.187 | cxl34b.11 | -0.111 |
| sema3d | 0.184 | col17a1a | -0.109 |
| ptgs1 | 0.183 | itgb1b.2 | -0.106 |
| hoxd3a | 0.182 | cotl1 | -0.106 |
| rbms2b | 0.181 | itgb4 | -0.105 |
| dact2 | 0.178 | rps29 | -0.103 |
| tmeff1b | 0.176 | kera | -0.102 |
| si:ch211-218g23.6 | 0.176 | anxa2a | -0.102 |
| tspan7 | 0.175 | capgb | -0.101 |
| sp8a | 0.175 | col11a1a | -0.100 |
| inaa | 0.175 | pycard | -0.100 |