| Positive correlation | Negative correlation | ||
| Gene | r | Gene | r |
| pitx3 | 0.489 | krtt1c19e | -0.267 |
| pitx1 | 0.403 | rbp4 | -0.249 |
| shhb | 0.380 | krt5 | -0.248 |
| krt18a.1 | 0.347 | cyt1 | -0.237 |
| sox2 | 0.341 | cyt1l | -0.236 |
| shha | 0.332 | si:dkey-16p21.8 | -0.226 |
| foxf2a | 0.301 | lgals1l1 | -0.222 |
| ptch2 | 0.298 | si:dkey-33c14.3 | -0.216 |
| col15a1b | 0.297 | zgc:136930 | -0.214 |
| rarga | 0.285 | col11a1a | -0.213 |
| nectin3b | 0.280 | aep1 | -0.208 |
| arl3l1 | 0.279 | col1a1b | -0.207 |
| tnc | 0.271 | ecrg4b | -0.205 |
| dmbx1a | 0.269 | col2a1b | -0.202 |
| foxe3 | 0.268 | wu:fa03e10 | -0.201 |
| isl2a | 0.268 | col14a1b | -0.201 |
| fzd5 | 0.264 | si:dkey-183i3.5 | -0.200 |
| inhbaa | 0.254 | zgc:175088 | -0.198 |
| fgfrl1b | 0.253 | col1a1a | -0.193 |
| si:dkey-261h17.1 | 0.253 | col17a1a | -0.192 |
| cox4i2 | 0.249 | col1a2 | -0.187 |
| rassf10a | 0.244 | itgb1b.2 | -0.176 |
| bambia | 0.237 | ptgdsb.1 | -0.176 |
| lsp1 | 0.230 | DSG2 | -0.175 |
| otx2a | 0.229 | itgb3a | -0.173 |
| foxa2 | 0.226 | tuba8l2 | -0.172 |
| elovl6 | 0.225 | rhbg | -0.169 |
| phlda3 | 0.218 | col5a1 | -0.166 |
| pdgfab | 0.212 | igfbp2a | -0.164 |
| esm1 | 0.212 | pfn1 | -0.164 |
| marcksl1a | 0.212 | pon3.2 | -0.163 |
| sox3 | 0.206 | kera | -0.163 |
| tcf7l1a | 0.206 | cebpd | -0.155 |
| mmp15b | 0.202 | CABZ01044281.1 | -0.154 |
| bmp2b | 0.201 | itgav | -0.152 |