notochord homeobox
ZFIN 
Gene expression UMAP
Other cell groups
all cells |
blastomeres |
PGCs |
endoderm |
axial mesoderm |
muscle  |
mural cells / non-skeletal muscle  |
mesenchyme  |
hematopoietic / vasculature  |
pronephros  |
neural |
spinal cord / glia |
eye |
taste / olfactory |
otic / lateral line |
epidermis |
periderm |
fin |
ionocytes / mucous |
pigment cells |
Expression by stage/cluster
Correlated gene expression
| Positive correlation | Negative correlation | ||
| Gene | r | Gene | r |
| foxd3 | 0.240 | apoeb | -0.264 |
| chrd | 0.211 | apoc1 | -0.230 |
| LOC101885485 | 0.210 | LOC108190024 | -0.166 |
| arl4ab | 0.194 | si:ch211-222l21.1 | -0.156 |
| tdgf1 | 0.194 | crabp2b | -0.133 |
| ier2a | 0.176 | eef1a1l1 | -0.133 |
| ier2b | 0.176 | hspe1 | -0.126 |
| admp | 0.170 | nop2 | -0.121 |
| zgc:173742 | 0.160 | mid1ip1b | -0.118 |
| rasgef1ba | 0.159 | rpl11 | -0.117 |
| vgll4l | 0.158 | add3b | -0.114 |
| lamp2 | 0.157 | gata2a | -0.114 |
| nanog | 0.154 | dynll1 | -0.112 |
| blf | 0.151 | pkdccb | -0.109 |
| h1m | 0.147 | hsp90ab1 | -0.107 |
| acp5a | 0.146 | efnb2a | -0.106 |
| zgc:56676 | 0.146 | si:dkey-27i16.2 | -0.106 |
| si:dkey-68o6.5 | 0.143 | msgn1 | -0.105 |
| cited4b | 0.143 | ved | -0.103 |
| rcor1 | 0.141 | ywhaqb | -0.103 |
| npc2 | 0.140 | hmga1a | -0.103 |
| dact2 | 0.139 | anp32e | -0.103 |
| inka1a | 0.137 | bambia | -0.102 |
| spink2.1 | 0.135 | rpl26 | -0.099 |
| mkrn4 | 0.135 | kazald2 | -0.099 |
| gtf2a1 | 0.135 | hnrnpa1b | -0.098 |
| CR450793.1 | 0.132 | tfap2c | -0.098 |
| h2afx | 0.132 | tp53inp2 | -0.096 |
| si:ch73-160h15.3 | 0.132 | ncl | -0.096 |
| gadd45ba | 0.131 | ptmab | -0.095 |
| rbm7 | 0.130 | efnb2b | -0.095 |
| higd1a | 0.129 | gata6 | -0.094 |
| ccna1 | 0.129 | sult6b1 | -0.093 |
| dnajc1 | 0.127 | gata5 | -0.093 |
| CR847803.1 | 0.125 | rps15a | -0.093 |