notochord homeobox
ZFIN 
Gene expression UMAP
Other cell groups
all cells |
blastomeres |
PGCs |
endoderm |
axial mesoderm |
muscle  |
mural cells / non-skeletal muscle  |
mesenchyme  |
hematopoietic / vasculature  |
pronephros  |
neural |
spinal cord / glia |
eye |
taste / olfactory |
otic / lateral line |
epidermis |
periderm |
fin |
ionocytes / mucous |
pigment cells |
Expression by stage/cluster
Correlated gene expression
| Positive correlation | Negative correlation | ||
| Gene | r | Gene | r |
| sp5l | 0.743 | krt8 | -0.566 |
| admp | 0.716 | rpl37 | -0.560 |
| cdx4 | 0.673 | rps10 | -0.549 |
| hspb1 | 0.669 | krt18a.1 | -0.549 |
| cdkn1ca | 0.637 | col2a1a | -0.544 |
| marcksb | 0.599 | zgc:114188 | -0.541 |
| foxa2 | 0.596 | col9a1b | -0.517 |
| hnrnpabb | 0.595 | sparc | -0.517 |
| hnrnpub | 0.594 | col11a1a | -0.512 |
| khdrbs1a | 0.588 | zmp:0000000760 | -0.511 |
| etv4 | 0.586 | col9a2 | -0.511 |
| npm1a | 0.586 | si:ch73-23l24.1 | -0.511 |
| ilf3b | 0.581 | col9a3 | -0.501 |
| rbm4.3 | 0.579 | cmn | -0.500 |
| hes6 | 0.578 | rps17 | -0.498 |
| hnrnpa1b | 0.578 | zgc:113232 | -0.494 |
| hnrnpa1a | 0.577 | cnmd | -0.475 |
| syncrip | 0.569 | col11a2 | -0.452 |
| NC-002333.4 | 0.566 | col8a1a | -0.441 |
| ncl | 0.565 | epyc | -0.429 |
| ilf2 | 0.563 | selenom | -0.426 |
| nop58 | 0.561 | zgc:162730 | -0.418 |
| nucks1a | 0.561 | ucmab | -0.411 |
| twist2 | 0.557 | ctgfa | -0.398 |
| anp32e | 0.556 | slc3a2a | -0.396 |
| hmga1a | 0.556 | agtrap | -0.392 |
| seta | 0.555 | matn3a | -0.390 |
| acin1a | 0.554 | zgc:158463 | -0.388 |
| snrpa | 0.552 | rps23 | -0.387 |
| srsf1a | 0.550 | rpl28 | -0.386 |
| safb | 0.548 | krt5 | -0.385 |
| ddx39ab | 0.546 | tgfb3 | -0.384 |
| top1l | 0.546 | rps27.1 | -0.383 |
| fgf8a | 0.543 | rplp1 | -0.383 |
| hnrnpa0b | 0.543 | faua | -0.382 |