notochord homeobox
ZFIN 
Gene expression UMAP
Other cell groups
all cells |
blastomeres |
PGCs |
endoderm |
axial mesoderm |
muscle  |
mural cells / non-skeletal muscle  |
mesenchyme  |
hematopoietic / vasculature  |
pronephros  |
neural |
spinal cord / glia |
eye |
taste / olfactory |
otic / lateral line |
epidermis |
periderm |
fin |
ionocytes / mucous |
pigment cells |
Expression by stage/cluster
Correlated gene expression
| Positive correlation | Negative correlation | ||
| Gene | r | Gene | r |
| sox19a | 0.458 | rpl37 | -0.263 |
| nkx1.2la | 0.452 | zgc:114188 | -0.254 |
| her3 | 0.397 | rps10 | -0.253 |
| fgf8a | 0.368 | rps17 | -0.241 |
| sp5l | 0.365 | fabp3 | -0.184 |
| ptgdsb.1 | 0.358 | eef1b2 | -0.183 |
| sp5a | 0.352 | rps23 | -0.174 |
| foxd5 | 0.349 | rps25 | -0.169 |
| ptgdsb.2 | 0.339 | rpl28 | -0.168 |
| cdx4 | 0.336 | rpl9 | -0.165 |
| admp | 0.325 | eef1da | -0.165 |
| pou5f3 | 0.317 | rpl19 | -0.164 |
| foxb1b | 0.313 | vdac2 | -0.162 |
| apela | 0.311 | rps27a | -0.161 |
| sox3 | 0.303 | zgc:158463 | -0.161 |
| sp8b | 0.297 | rps27.1 | -0.159 |
| tuba1a | 0.295 | faua | -0.159 |
| sox2 | 0.293 | eef1g | -0.157 |
| nradd | 0.291 | mt-nd1 | -0.156 |
| si:ch211-137a8.4 | 0.286 | rpl36a | -0.156 |
| foxb1a | 0.275 | vdac3 | -0.155 |
| etv4 | 0.275 | rpl23 | -0.155 |
| si:ch211-152c2.3 | 0.274 | rps20 | -0.155 |
| znfl2a | 0.265 | rplp0 | -0.153 |
| BX927327.1 | 0.260 | rpl17 | -0.151 |
| tbxta | 0.258 | rps14 | -0.151 |
| chrd | 0.256 | rpl10 | -0.150 |
| sp9 | 0.252 | rps24 | -0.149 |
| tle2a | 0.250 | atp5f1b | -0.149 |
| XLOC-003690 | 0.250 | rps2 | -0.149 |
| arl5c | 0.249 | cct2 | -0.148 |
| ca9 | 0.249 | tuba8l2 | -0.148 |
| hnrnpub | 0.245 | zgc:56493 | -0.146 |
| lig1 | 0.245 | romo1 | -0.145 |
| asb11 | 0.243 | sparc | -0.144 |